Oryctolagus cuniculus (rabbit): 100358645
Help
Entry
100358645 CDS
T03373
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100358645
03036 Chromosome and associated proteins [BR:
ocu03036
]
100358645
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
100358645
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100358645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100358645
NCBI-ProteinID:
XP_051683306
Ensembl:
ENSOCUG00000007579
LinkDB
All DBs
Position
X:complement(69342445..69542722)
Genome browser
AA seq
2500 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAQSSEESEETSSPPRPTMHQSIDKTSGSGNNSDMIENS
REEGTSSSEKSRSSGLSRSKRKPSIVTKYVESDDEKPLDETVNEDASNENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHF
QKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKVD
NEKSNKVYDHTSRFSPKKNSANCNGEEKKLDDSCSGSVTYSYSALTVPKELIKKTKKLIE
TTANMNSSYVKFLKHATDISEINAATKLRQLKAFKSVLADIKKAHLALEEELNSEIQALD
SINREKHTKEHKVIDTKSETKVRKGEKPCALERKDISKSDTKLSRKHIDSEHMDHNVATE
EQRANKSISGEHKKSDRKEEPQYEPTNTAEDLDMDIVSVPSSVPEDIFENLENAMEVHCT
VDYQGDGNSGTEQELEHSPVKSNIPSKDNRRGIKSKTTAKVTKELYVKLTPVSLSNSPVK
GADYHDVPHDKDDYKSSSLNPKSEKRGPGQESSDNEPLLENELSLPLEDSDLRRSPRVKT
TPLRRQTETNPATSNSDEESHETVKEKQKLLVPMRKKDKRNSSDSAVDNPKPTKLPKSKQ
SELVDPNSDSDEMLTVLKEVSRMSHSSSSDTDINEVHTNHKTQRGKDDKGKRKRKSSTSG
SDFDIKKGKSTKNTMISKKKRQNLSESSNYDSELEKEIKSMSKIGAAKTTKKRVPNKRDD
SSEDEKHNKKGIDNQGQKEGSSDDVERKQQKENFSSAEGTVNNDKTLIELRDRLSKNQQP
NVSSDGADKPSSGKEESLNSLEDKKVAEAKEKSKRLKTKICKKVQGGISDVAEKFPKKEQ
SDESSEDDKKQSKRGSEGKEKKTTDFKKKIKMDQQEESSSDGMEKSPEGEEIHFSKGIKQ
NKNSTTDGEKKSKKIKDKTSKKKEELLDNAEKLPGKGDSYDSLEEKKNRNGASGRAKKRS
SLSEKSSRKRQDCSSSDTEKYSMKEDGCDSPDKRLRRIELRERRNLNSKRNTKEIQIGSS
SSDAEESSEDNKKQKRQRTSAKTKAGNIKDKKRNSIRTSTKRKQADITSSSSSDIGDDDQ
NSIGEGSSDEQKIKPVTENLVVSSHTGFCQSSVSLDLTHKKLSVIHQGLGPSSAAFPGDE
ALSKSVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEEGSSDDEPQEGKKRTGKQNE
ENPGDEEAKNQVNYESDSDSEESKKPRYRHRLLRHKLSVSDGESGEEKKTKPKEHKEAKS
RNRRKVSSEDSEDSDFQESGVSEEVSESEDDQRPRTRSAKKAELEENQRSYKQKKKRRRI
KVQEDSSSENKSNSEEEEEKEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQ
NALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHR
NMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLC
DKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDEEKLEVSELATVKRPQERSYMLQRWQE
DGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKA
MNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTM
VDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLDHL
TAGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIAS
DSDETSMSLSSDDYTKKKKTKGKKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGDGNVDE
TGNNPSVSLKLEESKATSSSNPSSPAPDWYKDFVTDADAEILEHSGKMVLLFEILRMAEE
IGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTA
QSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVY
RFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEP
DLLDDPNSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERK
AAWAEYEAEKKGLTMRFNIPTGTNLPPVTFSAQTPYIPFNLGALSAMSNQQLEDLINQGR
EKVVEATNSVTAVRIQPLEDIISAVWKENMNLSEAQVQALALSRQASQELDVKRREAIYN
DVLTKQQMLISCVQRILMNRRLQQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQ
QIDMRGMYQSVAAGMQPPPLQRAPPPMRSKNPGPSQGKSM
NT seq
7503 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagcccatgagtgaaagcaagttgaatacattggtgcagaagcttcatgac
ttcctggcacagtcatctgaagaatctgaagaaacaagctctcctccacgacctacaatg
caccaaagcatagataaaaccagtggttctggaaataactctgatatgattgaaaacagc
agggaagagggaactagctcttcagaaaaatccagatcttcaggattgtcacgatcaaag
aggaaaccttcaattgtaacaaagtatgtagaatctgatgatgaaaaacctttggatgaa
actgtaaatgaagatgcttctaatgaaaattcagaaaatgatattactatgcaaagtttg
cccaaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcgga
gaagatgggcttcatgggattgtaagctgcacagcttgtggacaacaggtcaatcatttt
cagaaagattccatttatagacacccttcactgcaagtccttatttgtaagaattgcttt
aagtattacatgagtgatgatattagccgtgactcagatggaatggatgaacaatgtaga
tggtgtgcagaaggtggaaacttgatttgttgtgacttttgccataatgccttttgcaag
aaatgtattctgcgcaaccttggtcgaaaagagctctctacaataatggatgaaaacaac
cagtggtattgctacatttgtcacccagagcctttgttggacttggtcactgcatgtaac
agtgtatttgagaatttagaacagttactgcaacaaaataagaagaagataaaagttgat
aatgaaaagagtaataaagtatatgaccatacatctagattttctccaaagaaaaatagt
gcaaattgtaatggagaagaaaagaaattagatgactcatgttctggttctgtaacctat
tcttattcagcactaactgtgcccaaagagttgattaagaaaacaaaaaagctaattgag
accacagccaacatgaactctagttatgttaaatttttgaagcatgcaacagatatttct
gaaatcaatgcagctacaaagttacggcaacttaaggcttttaaatctgtgttggctgat
atcaagaaggctcatcttgcattagaagaagagttgaattcagagattcaagctttggac
agtatcaacagagagaaacataccaaagagcacaaggtcatagatactaagtctgaaaca
aaagtacgaaaaggagagaaaccctgtgctttggaaaggaaagacatttccaaatcagac
actaaactgtcaagaaaacacatagatagtgagcacatggatcacaatgttgcaacagag
gaacaaagagcaaacaaaagcattagtggtgaacataagaagtctgatagaaaagaagaa
cctcaatatgaacccactaacactgctgaagacttagatatggatattgtgtctgttcct
tcttcagttccagaagacatttttgagaatcttgagaatgctatggaagttcattgtaca
gttgattatcaaggagatggcaacagtggaactgagcaagaactggagcattcgcctgta
aaatcgaatatcccttcaaaagacaacagaagaggtattaaatcaaaaactacagctaaa
gtaacgaaagaattgtatgtgaaactgacacctgtttccctttctaattccccagttaaa
ggtgctgattatcacgacgttccacacgacaaagatgactataaaagttctagtctaaat
cccaagtcagagaaacgtggacctggacaggaaagcagtgataatgagcctttgcttgaa
aatgagctttcattacctttagaagattctgatcttcgaagatccccacgtgtgaagact
acacctttgaggcgacagacagaaaccaaccctgcaacatctaattcagatgaagagagt
catgaaacagttaaggagaagcaaaaattattagttccaatgagaaaaaaggataagaga
aattcttctgacagtgctgtggataatccaaaacctactaaattgcctaaatctaagcag
tcagagttggtagatccaaattcagattctgatgaaatgctaacagtcctcaaagaagta
agcaggatgagtcacagttcttcttccgatactgatattaatgaagtacatacaaatcac
aagactcaaagggggaaagatgataaaggaaaaaggaaacggaaaagttctacttctggg
tcagattttgatattaaaaaaggcaaatcaactaaaaatactatgatttctaaaaagaaa
cgacaaaacctgtctgaatcttctaattatgactcggaattagaaaaagagataaagagt
atgagtaaaattggggctgctaaaacaactaaaaaaagagttccaaataaaagagatgat
tcttctgaagatgaaaaacacaacaaaaaaggaatagataatcaagggcagaaagaagga
tcatctgatgatgttgaaaggaaacaacaaaaagagaatttctcttcagcagaaggtaca
gttaataatgacaagaccctcatagaattaagagaccgtctctctaaaaatcagcagcca
aatgtttcctctgatggtgctgataagccttcttctggaaaagaggagagtttaaattct
ctagaagacaaaaaggttgctgaagctaaagaaaagagcaaacgtctgaaaaccaaaatt
tgtaagaaagtacagggtggcatatctgatgttgctgagaaattcccaaagaaagagcaa
agtgacgaatcctctgaagatgataaaaagcagagtaaaagggggagtgaaggaaaagaa
aagaaaactacagatttcaagaaaaaaattaaaatggatcaacaagaggaatcatcatct
gatggaatggagaaatcacctgagggagaagaaattcatttttcaaagggcataaaacaa
aataaaaatagcacaactgatggggaaaagaaaagtaaaaaaataaaagataaaacttct
aaaaagaaagaagaattacttgataatgctgagaagttaccagggaaaggggatagttat
gactctttagaagagaaaaagaataggaatggagcatctggtagagcgaagaaaaggtcc
agcttgtctgaaaagagttcaaggaagagacaagattgttcgtcatctgatactgagaaa
tactctatgaaagaagatggttgtgattctccagataagagactgagaagaatagaactg
agggaaagaagaaacttaaattcaaagagaaataccaaggaaatacaaattggctcatca
tcttctgatgcagaagaaagttctgaagataataaaaagcagaagagacaaagaacatca
gctaaaactaaggcaggcaatatcaaggataaaaagagaaactccataagaacaagcact
aaaaggaagcaagcggacattacttcctcatcttcttctgatataggtgatgatgatcag
aattctataggcgaagggagcagtgatgagcagaaaattaagcccgtgactgaaaattta
gtggtatcttcacatactggattttgccaatcatcagtctcacttgatttgacacataag
aagctttctgttattcaccaaggacttgggccatcctctgctgctttcccaggagatgaa
gctctatctaaatcagtgcctgtcacagtggatgatgatgacgatgacaatgatcctgag
aatagaattgccaagaagatgcttttagaagaaattaaagccaatctttcttctgatgag
gagggatcttcagatgatgaaccacaagaagggaaaaagagaactggaaaacaaaatgaa
gaaaatccaggagatgaggaggcaaaaaatcaagtcaattatgaatcagattcagattct
gaagaatctaagaagccaaggtacagacatagacttttgaggcataaactgtctgtgagt
gatggtgaatctggagaagaaaaaaagacaaagcctaaagaacataaagaagccaaaagc
agaaatagaaggaaagtgagcagtgaagattcagaagattctgattttcaggagtcagga
gttagtgaagaagtttctgaatctgaagatgatcaacggcccagaacaaggtctgcaaag
aaagcagaattggaagaaaatcagcggagttataaacagaaaaagaaaaggcgacgcatt
aaggttcaagaggattcatcttctgaaaacaagagtaattctgaagaagaagaagaaaaa
gaagaggaggaggaagaagaggaggaggaagatgaaaatgatgactctaagtctcctgga
aaaggcagaaaaaaaattcgaaaaattcttaaagatgataaactaagaacagaaacacag
aatgctcttaaagaagaggaagaaaggagaaaacgtattgctgagagggagcgtgagcga
gagaaattgagagaggtgatagaaattgaagatgcttcacctaccaagtgtccaataaca
accaagttggttttagatgaagatgaagaaaccaaggaacctttagtacaggttcataga
aatatggttatcaaattgaaaccccatcaagtagatggtgttcaatttatgtgggattgc
tgttgtgagtctgtgaaaaagacaaagaaatctccagggtcaggatgcattcttgcccac
tgcatgggccttggtaagactttacaggtggtaagttttcttcatacagttcttttgtgt
gacaaattggatttcagcacagctttagtggtttgtcctcttaatactgctttgaattgg
atgaatgaatttgagaaatggcaagaaggattaaaagatgaagaaaagctcgaggtctct
gaattagcaactgtgaaacgtcctcaggagagaagctacatgctgcagaggtggcaagaa
gatggtggtgttatgattataggttatgagatgtatagaaatcttgctcaaggaaggaat
gtgaagagtcggaaacttaaagaaatatttaacaaagctttggttgatccaggccctgac
tttgttgtttgtgatgaaggccatattctaaaaaatgaagcttctgctgtttcaaaagct
atgaattctatacgatcaaggaggagaattattttaacaggaacaccacttcaaaataac
ctaattgaatatcactgtatggttaactttatcaaggaaaatttgcttggatccattaag
gagttcaggaatagattcataaatccaattcagaatggtcagtgtgccgattccaccatg
gtagatgtcagagtgatgaaaaaacgtgctcatattctctatgagatgttagctggatgt
gttcagaggaaagattatacagcattaacaaagttcctgcctccaaaacatgaatatgtg
ttagctgtgagaatgactcctattcaatgcaagctctatcagtactacttagatcactta
acagcaggtgtaggtaatagcagtgaaggcggaagaggaaaggcaggtgcaaaacttttc
caagattttcagatgttaagtagaatctggactcatccttggtgtttacagctggactat
attagcaaagaaaataagggatattttgatgaagacagtatggatgaatttatagcttca
gattcagatgagacctccatgagtttaagctccgatgattatacaaaaaagaagaaaaca
aagggaaaaaaggggaaaaaagatagtagctcaagtggaagtggcagtgacaatgatgtt
gaagtgattaaagtatggaattcaaggtctcgaggaggtggtgacggaaatgtggatgaa
acaggaaacaacccttcagtttctttgaagctggaagaaagtaaagctacttcctcttct
aatccaagcagcccagctccagattggtacaaagattttgttacagatgctgatgctgag
attttagaacattctggaaaaatggtacttctctttgaaattcttcggatggcagaggaa
attggagataaagtccttgttttcagccagtctctcatatctctggatttgatagaagat
tttcttgaattggctagtagagagaaaacagaagataaagataaaccccttatttataaa
ggtgaagggaagtggctccgaaacattgactactatcgtttagatggttctactactgca
cagtcaaggaagaagtgggctgaagaatttaatgatgaaactaatgtgagagggcgattg
tttatcatttccaccaaagcaggatctcttggaattaatctggtagctgctaatcgagta
attatatttgatgcttcttggaatccatcttatgacatccagagtatattcagagtttat
cgctttggacagactaagcctgtttatgtatataggttcttagctcagggaaccatggaa
gataagatttatgatcggcaagtaactaagcagtcactctcctttcgagttgttgatcag
cagcaggttgagcgtcattttactatgaatgagcttactgaactttatacttttgagcca
gacttattagatgaccctaattcagaaaagaagaagaagagagatactcccatgctgcca
aaggatactatacttgcagaacttcttcagatacataaagaacacattgtaggatatcat
gaacatgattctcttttggaccacaaagaagaagaagagttgactgaagaagaaagaaaa
gcagcttgggcggagtatgaagctgagaagaagggactgaccatgcgtttcaacatacca
actgggaccaatttaccccctgtcactttcagcgctcagactccttatattcctttcaat
ttgggagccctatcagcaatgagtaatcaacagctggaggatcttatcaaccaaggaaga
gaaaaagttgtggaagcaacaaacagtgtgacagccgtgaggattcagcctcttgaagat
ataatttcagctgtatggaaggaaaacatgaatctctcagaggcccaagtacaggcacta
gcattaagtagacaagccagccaggagcttgatgttaaacgaagagaggcaatctacaac
gatgtattgaccaaacaacagatgttaatcagctgtgttcagcgaatacttatgaaccga
aggctccaacagcagtacaatcagcaacagcagcaacaaatgacttatcaacaagcaaca
ctgggtcacctcatgatgccaaagcctccaaatttaatcatgaatccttctaactaccag
cagattgatatgagaggaatgtatcagtcagtggctgctggtatgcagccaccaccatta
cagcgtgcaccacccccaatgagaagcaaaaatccaggaccttcccaagggaaatcaatg
tga
DBGET
integrated database retrieval system
