Oryctolagus cuniculus (rabbit): 100358679
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Entry
100358679 CDS
T03373
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04151
PI3K-Akt signaling pathway
ocu04510
Focal adhesion
ocu04512
ECM-receptor interaction
ocu04518
Integrin signaling
ocu05145
Toxoplasmosis
ocu05146
Amoebiasis
ocu05165
Human papillomavirus infection
ocu05200
Pathways in cancer
ocu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100358679
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100358679
04518 Integrin signaling
100358679
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100358679
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100358679
09162 Cancer: specific types
05222 Small cell lung cancer
100358679
09172 Infectious disease: viral
05165 Human papillomavirus infection
100358679
09174 Infectious disease: parasitic
05146 Amoebiasis
100358679
05145 Toxoplasmosis
100358679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
CorA
F5_F8_type_C
DUF348
Motif
Other DBs
NCBI-GeneID:
100358679
NCBI-ProteinID:
XP_051705648
Ensembl:
ENSOCUG00000014676
LinkDB
All DBs
Position
7:128923532..128996897
Genome browser
AA seq
1831 aa
AA seq
DB search
MEGPLSSLSEHLPFPSTFPERKTRRKGRRLGRYLVPSAVLAARLQAPDMGLLQVLLCSFL
ALQVRAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQEDKK
CFVCDSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVENVTIQLDLEAEFHFTH
LIMTFKTFRPAAMLIERSSDFGQTWGVYRYFAYDCESSFPGISTGPMKKVDDIICDSRYS
DIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIR
EKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCLCRHNTKGLNCELCMDF
YHDLPWRPAEGRNSNACKKCNCNEHSGSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCE
QCKPFYYQHPERDIRDPNVCERCTCDPAGSQNEGICDSYTDFSAGLIAGQCRCKLYVEGE
HCDVCKEGFYDLSAEDPFGCKSCACNPLGTIPGGNPCDSATGYCYCKRLVTGQRCDQCLP
EHWGLSNDLDGCRPCDCDLGGALNNSCSAESGQCSCRPHMIGRQCNEVESGYYFTTLDHY
IYEAEEANLGPGVSIVERLYIQDRTPSWTGAGFVRVPEGAYLEFFIDNIPYSMEYDILIR
YEPQLPDHWEKAVITVQRPGKIATSSRCGNTVPDDDNQVVSLSPGSRYVVLPRPVCFEKG
MNYTVRLELPQYTSSDSDVDSPYTFIDSLVLMPYCKSLDIFTVAGSGDGVVTNSAWETFQ
RYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCR
PNVVGRTCDRCAPGTFGFGPSGCKPCDCHLQGSVNAFCDAITGQCHCFQGVYSQQCNRCL
PGYWGFPACQPCQCNGHADDCDLVTGQCLGCQDYTTGHNCERCLAGYYGDPIIGSGDHCR
PCPCPDGPGSGRQFAGSCYQDPVTLQLECVCDSGYIGPRCDECASGYFGNPSEVGGSCQP
CQCHHNIDTTDPEACDKETGKCLKCLYHTDGDRCELCRFGYYGDALRQDCRKCVCNSLGT
VQDHCNSSDCQCDKATGQCLCLPNVIGQNCDRCAANTWQLASGTGCDPCNCNELHSFGPS
CNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPMGIETPQCDQSTGQCVCVE
GVEGPRCDKCTRGYSGVFPNCTPCHQCFALWDTIIAELTNRTHRFLEKAKALKISGVIGP
YRETVDSVEKKVNEIRDILAHSPAAEPLKNIGNLFEEAEKLTKDVIERMAQVEVKLSDTA
SQSNSTTTQLESLQAEAENLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERV
NASTTDPHSTVEQSALTRERVEDLMMEQESRFREKQEEQARLLDELAGKLQSLDLSAVAE
MTCGTPPGASCSETECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVLSAL
AEVEQLSKMVSEAKQRADEAKQNAQGVLLKTNATKEKVDKSNEDLRNLIKQIRDFLTQDS
ADLDSIEAVANEVLKMEMPSTPEQLQNLTEDIRERVESLSQVEVILQQSAADIARAEMLL
EEAKRASKSATDVKVTADTVKEALEEAEKAQIAAEKALKQADEDIQGTQNLLTSIESETA
ASEETLFNASQRISELERNMEELKRKSAQNSGEAEYIEKVVHSVKQSVEDVKKVLDGELG
EKYKQAENVIAKKSQESADARRKAEMLQNEAKTLLAQANSKLQLLKDLERKYEDNQKYLE
DKAQELVRLEGEVRSLLKDISQKVAVYSTCL
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggaagggcccctctcctctctctctgaacatttgccgtttccctccacctttccagaa
aggaaaacgagaagaaaaggcaggcggctcggcaggtacctggtcccctccgctgtcctg
gccgcgcggctacaggcaccggacatggggctcctccaggtgttgctttgcagtttctta
gccctgcaggtgcgcgctcaagaacccgagttcagctacggctgtgcggaaggcagctgc
taccccgccaccggcgacctgctcattggccgcgcgcagaagctgtcggtgacttcgacc
tgtgggttgcacaagcccgaaccctactgtattgtcagccacctgcaggaggacaagaaa
tgcttcgtatgcgattcccaagatccttatcacgagaccctcaatcctgacagccatctc
attgagaacgttgtcaccaccttcgcgccaaaccgcctgaagatttggtggcaatctgaa
aatggtgtggaaaatgtcactatccagctggacttggaagcagaattccattttacccat
ctcataatgaccttcaagacattccgtccggctgctatgctgatagagcgctcctctgac
tttgggcagacctggggtgtgtacagatacttcgcctatgactgcgagagctcctttccc
ggcatctcaacgggccccatgaagaaagtcgatgatataatctgtgactcccgatactct
gacatcgagccctcaacggaaggagaggtgatatttcgtgctttagatcctgctttcaaa
atagaagatccttacagcccaaggatacagaatctattaaaaatcaccaacttgagaatc
aagttcgtgaagctgcatactctgggagataaccttttggattccagaatggaaatcaga
gagaagtactactacgcggtgtatgatatggtggttcgaggaaactgcttctgctacggc
catgccagcgagtgcgcccctgtggatggattcaatgaagaagtggagggaatggtacat
ggccactgcctgtgcaggcataacaccaagggcctcaactgtgaactgtgcatggacttc
taccatgacctcccctggagacctgccgaaggccgaaacagcaatgcttgcaaaaagtgt
aactgcaacgagcattccggctcgtgccactttgacatggcggtgtacctggccaccggc
aacgtcagcgggggcgtgtgcgatgactgtcagcacaacaccatgggccgcaactgtgag
cagtgcaaacccttttactaccagcacccggagagggacatccgggatcccaacgtctgt
gagcgatgcacctgtgatcccgccggttctcagaatgaaggcatctgtgacagttacacc
gacttctcagcgggtctcattgctggtcagtgtcggtgtaaactatatgtggaaggggag
cattgtgatgtctgcaaggaaggcttctatgacttgagtgccgaggacccatttggttgt
aaatcttgtgcttgcaatcccctgggaaccattcccggcgggaatccttgtgattcggcg
actgggtactgctactgtaagcgcctggtgacaggacagcgctgtgaccagtgtctgcca
gagcactggggcttgagcaatgatctggatggatgtcgaccttgcgactgtgaccttggg
ggagccttaaataacagttgttccgcggaatcagggcagtgctcgtgtcggccccacatg
atcgggcgtcagtgcaacgaggtggaatctggatactacttcaccaccctggatcactac
atctatgaggccgaggaggccaatctggggccgggagtcagcatagtggagcggctgtac
atccaggaccggactccctcctggactggagctggcttcgtccgagtgcctgaaggagct
tatttggagtttttcattgacaacataccctattcgatggagtatgacatcctgattcgc
tatgagcctcagctccccgaccactgggaaaaggctgtcatcactgtgcagcgaccagga
aagattgcaaccagcagccgatgtggtaacactgttcccgatgatgacaaccaggtggtg
tcgttgtccccgggctcaaggtacgtggtccttcctcgccccgtgtgctttgagaagggc
atgaactacacggtgaggctggagctgccgcagtacacctcctccgacagtgacgtggac
agcccttacacattcatcgactcacttgtcctcatgccgtactgtaaatccctggacata
ttcaccgtggcagggtcgggagatggggtggtcaccaacagtgcctgggaaacctttcag
aggtaccgatgtctggagaacagcaggagcgttgtgaaaacgcccatgacagatgtttgc
agaaacatcatcttcagcatttctgccttgctgcaccagaccggcctggcttgtgaatgc
gacccccagggctcactgagttccgtgtgtgaccctaatggaggccagtgccagtgccgg
ccgaacgtggtgggaagaacctgcgacaggtgtgccccgggcaccttcggcttcggcccc
agcggatgcaaaccttgtgactgccacctgcaaggatcggtcaacgccttctgcgatgcc
atcactggccagtgccactgtttccagggggtgtattctcagcagtgtaatcgatgcttg
cctgggtactggggctttcccgcctgccagccctgccagtgcaatgggcatgctgacgac
tgtgacttggtgacagggcagtgcctgggctgccaggactacaccacgggtcataactgt
gaaaggtgcttggctggttactatggtgaccccatcattgggtcgggtgatcactgccgc
ccttgcccttgcccggacggtcccggcagtggccgccagtttgccggaagctgttaccag
gatcctgttactttgcagcttgagtgtgtgtgtgattctggatatattggccccagatgt
gatgagtgtgcctcgggatacttcggcaatccctcggaggtcggggggtcatgtcagccc
tgccagtgtcaccacaacatcgacacgacggacccggaagcctgtgacaaggagacgggg
aagtgcctcaagtgcctgtaccacacggacggggaccgctgtgagctgtgtcgctttggc
tactacggggacgccctgcggcaggactgcaggaaatgtgtctgcaattccctgggcacc
gtgcaggatcactgcaacagctccgactgccagtgcgacaaagccaccggccagtgcctg
tgtcttcccaatgtcatcgggcagaactgtgaccgctgtgcggccaacacctggcagctg
gccagcggcaccggctgtgacccctgcaactgcaacgagctacattccttcgggccatct
tgtaatgagttcacggggcagtgccagtgcatgcccggctttggaggccgcacctgcagc
gagtgccaggagctcttctggggagaccccgacgtggagtgccgagcctgtgactgtgac
cccatgggcatcgagacgccgcaatgtgaccagtccacgggccagtgtgtctgtgtggag
ggtgtcgaggggccccgctgtgacaagtgcacacgagggtactcgggagtcttccccaac
tgcacgccctgccaccagtgctttgccctctgggacacgatcatcgccgagttgaccaac
aggacgcataggttcttggaaaaagccaaagccttgaagatcagcggtgtgattgggcct
taccgggagaccgtggactcagtggagaagaaggtcaatgagatcagagacatcctggcc
cacagccccgcagccgagccgctgaaaaacatcgggaatctcttcgaggaagcagagaaa
ctcaccaaagatgtgatagagaggatggcccaggtagaagtgaagttatctgacacagct
tcgcaaagcaacagcacgaccacacaactggagtctctacaggcagaggcggagaacctg
gacaacactgtgaaagaactcgccgaacaactggaatttatcaagaactctgatattcga
ggcgccttggatagcattaccaagtatttccagatgtctcttgaagcagaagagagggtg
aatgcctccaccacagatccccacagcaccgtggagcagtcagctctcacgcgagaaaga
gtggaagacttgatgatggagcaggagtcccggttcagagagaaacaggaggagcaggcc
cgccttcttgatgaactggcaggcaaactacaaagcttagacctgtcagctgtggccgag
atgacctgtggcacgcctccaggggcctcctgttccgagactgagtgtggcggccccaac
tgcagaaccgacgagggagagaagaagtgtggggggcctggctgcggcggcctggtcacc
gtcgcccatagtgcctggcagaaggccatggactttgaccgagatgtcctgagcgccctg
gctgaagtggagcagctctccaagatggtctctgaagcaaaacagagggcagatgaagca
aaacagaacgctcagggtgttctgctgaagacaaacgcaactaaagaaaaagtggacaag
agcaatgaggacctgagaaacctgatcaagcaaatccgagacttcctgacccaggacagt
gctgatctggacagcatcgaagcggttgcgaatgaagtcctgaaaatggaaatgcctagc
acccctgagcagttgcagaacctgacggaagacatccgtgaacgagtcgagagcctctct
caagtagaggttatcctacagcagagcgcggctgacattgcaagagccgagatgctgtta
gaagaagctaagagagccagcaaaagcgcaacggatgttaaggtcaccgcagacacagta
aaggaagccctggaagaagcggaaaaggcccagattgcagccgagaaagcacttaaacaa
gcagatgaggacatccagggcacccagaacctgctgacttctattgagtctgaaacggca
gcttctgaggagaccttgttcaacgcctcccagcgcatcagcgagctcgagagaaacatg
gaagaactgaaacggaagtctgcccagaactcgggggaggcagagtatattgaaaaagta
gtgcattctgtgaaacaaagtgtggaagacgtcaagaaggttctcgatggggaacttggt
gaaaagtacaagcaagcagaaaacgtcatagccaaaaaaagtcaagagtcagccgacgcc
agaaggaaagctgaaatgctacagaatgaagcaaaaacacttctggctcaagcgaacagc
aagctgcaactgctgaaagatttagaaagaaaatatgaggacaatcaaaaatatttagaa
gataaagctcaagaactagtgaggctggaaggcgaggtccgctcactcctcaaggatata
agccagaaagttgctgtttacagcacctgcttgtaa
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integrated database retrieval system
