Oryctolagus cuniculus (rabbit): 100358728
Help
Entry
100358728 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100358728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100358728
Spliceosome [BR:
ocu03041
]
Complex C
Other components
Step II factors
100358728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_NWD2_C
eIF2A
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
100358728
NCBI-ProteinID:
XP_008272063
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MVSAEDQFAVMSAALAALAASYGSGSGSESDSDSEGGRCLLPAAESLMHLTKSPSAKPSL
AVAVDSAPEVAVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAXPRNM
LSGYGEPANINDFMFEQQRRTCATYGYALDPSLDNQVSAKYIGSVEEAEKNQGLTVFETG
QKKTEKRKKFKENDASNIDGFLGPWAKYVDEKDVAKASEEEQKELDEITAKRQKKGKLED
EKPGEEKTILHVKEMYDYQGRCYLHIPQDVGVNLRSSVPPEKCYLPKKQIHIWSGHTKGV
SAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRCCLRTFIGHSKAXRDICFNTAGTQFRSAA
YDRHLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVPGMSDKKIVQWDIRSGEIV
QEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSP
NGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGK
LNIWDWKTTKLYSQFKAHDKVCIGAVWHPQETSKVITCSWXGLIKLWD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgcagaggatcagtttgccgtcatgtcggctgctcttgcagctctggccgct
tcctacggttcgggttcggggtccgaatctgactcggacagtgaaggcggccgatgtctg
ctgccagccgccgagtctctcatgcatctgactaaatcgccttcggccaagccctcgctg
gcagtggcggtggactcggctccagaggtggcagttaaggaagatttggagactggtgtt
caccttgaccctgctgtcaaagaagttcagtataatcctacatatgagacaatgtttgct
cctgagtttggaccagaaaatccctttagaactcagcaaatggctngccccagaaatatg
ctttctggatatggtgaaccagctaacatcaatgacttcatgtttgaacagcagagaaga
acttgtgccacatatggttatgcactggatccttcattagataaccaagtatctgccaaa
tatattggttctgtagaagaagctgaaaaaaatcaaggtttaactgtgtttgaaactggt
cagaagaaaacagaaaagaggaaaaagttcaaagaaaatgatgcatctaatattgatggt
ttcttgggaccatgggcaaaatatgtggatgaaaaagatgtagccaaagcttcagaagaa
gaacaaaaagagctggatgaaatcacagcaaagaggcagaaaaaaggcaaactggaagat
gagaaacctggggaggagaagacaatcttacatgttaaagaaatgtatgactatcaaggc
aggtgctaccttcacatacctcaggatgttggtgtaaatctacggtcaagtgtgccacct
gagaagtgttatcttcccaaaaaacagattcacatatggtctggacacaccaagggcgtc
agtgcagtcagactgtttcctctctctggccatttgttgctgtcttgctccatggactgt
aaaattaagttgtgggaggtttatggagaccgctgctgtctgagaacatttattggtcac
agtaaagccngaagggacatctgcttcaacaccgcaggaacacagtttcgtagtgcagcc
tatgacagacacctgaagctctgggacactgagacaggacagtgtatatcaagatttaca
aaccgaaaagtgccctactgtgtcaaattcaatcctgatgaagacaagcaaaatctcttt
gtgcctgggatgtctgataaaaagattgtgcaatgggacattcgaagtggagaaattgtg
caggaatatgatcggcatttgggagctgtcaataccattgtttttgttgatgaaaacagg
agatttgttagtacatctgatgataagagcctaagagtttgggaatgggacatccctgtg
gatttcaagtatatagcagaacccagtatgcactcaatgcctgcagtgactttgtctcca
aatgggaaatggctagcatgccaatcaatggacaaccaaatcttaatttttggagcccag
aacagatttagattaaataagaaaaaaatttttaagggccacatggtagcaggttatgct
tgtcaggtggacttttcaccagacatgagctatgtgatttcaggagatggaaatggaaaa
ttaaacatttgggactggaagaccacaaaactctatagtcagtttaaagctcatgataaa
gtgtgtataggcgcagtgtggcaccctcaagaaacatctaaagtcataacgtgcagctgg
ngtggtctgattaaactgtgggattag
DBGET
integrated database retrieval system
