Oryctolagus cuniculus (rabbit): 100358886
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Entry
100358886 CDS
T03373
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04120
Ubiquitin mediated proteolysis
ocu04137
Mitophagy - animal
ocu05012
Parkinson disease
ocu05014
Amyotrophic lateral sclerosis
ocu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100358886 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100358886 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
100358886 (PRKN)
05014 Amyotrophic lateral sclerosis
100358886 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
100358886 (PRKN)
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GFIT
Motif
Pfam:
RVT_1
Exo_endo_phos
Exo_endo_phos_2
Flagellar_rod
FemAB_like
Motif
Other DBs
NCBI-GeneID:
100358886
NCBI-ProteinID:
XP_051711120
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Position
12:4103034..5479852
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AA seq
609 aa
AA seq
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MIKGSIQQEDVTIINVYAPNYRAPVYLKDMLRDLKGDLDSNTIVLGDFNTPLSEIDRSSG
QKINKETADLIDTIAQMDLTDIYRTFNPTSTDFTFFSAGHGTFSRIDHILGHKASLSKFK
RIRIIPCSFSDHSGMKLEISNSGNPRKYANTWRLNNMLLNEHWVIQEIKREIKNFLEVNE
DNTTYQNLWDTAKAVLRGKFIAIGAYTKKLERYQINELSAHLKDLEKLQQTKPKSSRRRE
IIKTREEINRIESKKTLQKISQARSWFFEKINKIDTPLAQLTKKRREKTQINKIRDEKGN
VTTDTTEIKRIIRNYYKDLYASKQENLSEMDRFLDTCNLPKLNHEDIENLNRPITETEIE
TVIKALPSKKSPGPDGFTAEFYQTFKEELIPFLLKLFRTIEKEGILPNSFYEASITLIPK
PEKDVALKENYRPISLMNIDAKILNKILANRIQQHIRKIIHPDQVGFIPGMQGWFNIRKS
INVIHHINRLQKKNHMIISIDAEKAFDKIQHPFMMKTLSKLGIEGTFLNIIKAIYKNPTA
SILLNGEKLEAFPLRSGTRQGCPLSPLLFNIVLEAKWKLRFSLLCTFVQILFPICLSSKK
RIHTRVCIA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgattaagggttcaattcaacaggaagatgtaactattataaatgtatatgcacctaat
tacagggcaccggtctatttaaaagatatgttaagggacttaaagggagatttagattcc
aatacaatagtactgggggacttcaatactccactctcagaaatagacagatcatccgga
cagaagatcaacaaggaaacagcagatttaattgacactattgcccaaatggatctaaca
gatatctacagaactttcaaccctacatctacagacttcacattcttctcagcagggcat
ggaaccttctctaggattgatcacatactaggccataaagcaagtctcagcaaatttaaa
agaattagaatcataccatgcagcttctcagaccacagcgggatgaagctggaaattagc
aactcaggaaaccccagaaagtatgcaaacacatggagactgaacaacatgctcctgaat
gaacactgggtcattcaagaaatcaaaagagaaatcaaaaactttctggaagtaaatgaa
gacaacacaacatatcaaaacttatgggatacagcaaaagcagtattgagaggcaaattt
atagcaataggggcctataccaagaaattggaaaggtaccaaataaatgagctttcagcg
cacctcaaggacctagaaaaactgcagcaaaccaaacccaaatctagtaggagaagagaa
ataattaaaaccagagaagaaattaacagaattgaatccaaaaaaacattacaaaaaatc
agccaagcgagaagctggttttttgaaaaaataaacaaaattgacaccccattggcccaa
ctaactaaaaaaagaagagaaaagacccaaatcaataaaatcagagatgaaaaaggaaac
gtaacaacagacaccacagaaataaaaagaatcatcagaaattactacaaggacctgtat
gccagcaaacaggaaaacctatcagaaatggatagattcctggacacatgcaatctacca
aaattgaaccatgaagacatcgaaaacctaaatagacccataactgaaacagaaattgaa
acagtaataaaggccctcccatcaaagaaaagcccaggaccagatggattcactgctgaa
ttctaccagacatttaaagaagaactaatcccatttcttctcaaactattcagaacaatc
gaaaaagagggaatcctcccaaattctttctatgaagccagcatcaccttaatccctaag
ccagagaaagatgtagcactgaaagaaaattacagaccaatttccctgatgaacatagac
gcaaaaatcctcaataaaattctggccaatagaatacaacaacacatcaggaaaatcatt
cacccagaccaagtgggattcatccctggtatgcagggatggttcaacattcgcaaatca
atcaatgtgattcaccacattaacagactgcagaagaaaaaccatatgattatctcaatt
gatgcagagaaagcatttgataaaattcaacaccctttcatgatgaaaactctaagcaaa
ttgggtatagaaggaacattcctcaatataatcaaagcaatttataaaaatcccacagcc
agcatcctattgaatggggaaaagttggaagcatttccactgagatctggcaccaggcag
ggatgcccactctcaccactgctatttaacatagttctggaagctaaatggaagttaaga
ttttctttattatgcacatttgtacagattttatttcctatttgcctttcttccaagaaa
aggatacatactagggtatgtattgcctag
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