| Entry |
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| Name |
(RefSeq) histone deacetylase 5 isoform X2
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| KO |
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| Organism |
ocu Oryctolagus cuniculus (rabbit)
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| Pathway |
| ocu04613 | Neutrophil extracellular trap formation |
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| Brite |
KEGG Orthology (KO) [BR:ocu00001]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
100358981
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100358981
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100358981
05203 Viral carcinogenesis
100358981
09165 Substance dependence
05034 Alcoholism
100358981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:ocu03036]
100358981
Enzymes [BR:ocu01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100358981
Chromosome and associated proteins [BR:ocu03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100358981
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
19:complement(41946535..41981012)
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| AA seq |
1115 aa
MNSPNESADGMSGREPALEILPRTPLHSIPVAVEVKPVLPGAMPSSLGGGGGGGGSPSPV
ELRGALAGPVDPALREQQLQQELLALKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHL
KQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLR
LQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPPGTPPSYKLPLLGPY
DNRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEITGAGPG
VPSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHRALPLDSSPNQFSLYTS
PSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGGTLTGKFMSTSSIPGC
LLGVALEGDASPHGHASLLQHVLLLEQARQQSALIAVPLHGQSPLVTGERVATSMRTVGK
LPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQLQLGKMLTKTGELPRQPT
THPEETEEELTEQQEVLLGEGALPMPREGSTESESTQEDLEEEEEDEEEDDEDCIQVKDE
EGESGPEEGPDSEESSAGYKKLFPDAQQLQPLQVYQAPLSLAAVPHQALGRTQSSPAAPG
SVKSPPDQPTKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKC
ERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVD
SDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNS
VAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAP
EEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVE
GHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVEL
QPLDEAVLQQKPNTNAVATLEKAIEIQSKHWSCVQRFAAGLGRSLREAQAGETEEAETVS
AMALLSVGAEQAQAAAAREHSPRSAEEPMEQEPTL |
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| NT seq |
3348 nt +upstreamnt +downstreamnt
atgaactctcccaacgagtcggcagatggcatgtcaggccgggaaccagccctggagatc
ctgccccggactcctctgcacagcatccccgtggcagtggaggtgaagccggtactgcca
ggagccatgcccagctccctggggggcgggggcgggggcggaggcagccccagccctgtg
gagctgcggggggccctggcgggccccgtggaccccgcgctgcgggaacagcagctgcag
caggagctcctggcgctgaagcagcagcagcagctgcagaagcagctcctgttcgccgag
ttccagaaacagcacgaccacctgacccggcagcatgaggtccagctgcagaagcacctc
aagcagcagcaggagatgctggccgccaagaggcagcaggagctggagcagcagcggcag
cgggagcagcagcggcaggaggagctggagaagcagaggctggagcagcagctgctcatc
ctgcgcaacaaggagaagagcaaagagagcgccatcgccagcacggaggtgaagctcagg
ctccaggagttcctcctgtccaagtcaaaggagcccacgccaggcggcctcaaccattcc
ctcccacagcaccccaaatgctggggagcccaccatgcttctttggaccagagttcccct
ccccagagcggcccccctgggacgcctccctcctacaaactgcctttgcttgggccctac
gacaaccgagatgacttcccgctccgcaagacagcctctgaacccaacttgaaagtgcgt
tcgaggctaaaacagaaggtggcggagcggagaagcagtcccctcctgcgtcgcaaggac
gggaccgtcatcagcacctttaagaagagagcagttgagatcacgggcgccgggcctgga
gtgccgtccgtgtgtaacagtgcgcctggttccggccccagctcccccaacagctcccac
agcaccatcgccgagaacggcttcactggctcagttcccaacatccccaccgagatgctc
ccccagcaccgggccctccctctggacagctcccccaaccagttcagcctctacacgtct
ccctctctgcccaacatctccctagggctgcaggccacggtcactgtcaccaactcacac
ctcactgcctccccgaagctgtcgacgcagcaggaggccgagaggcaggccctccagtcc
ctgcggcagggcggcacgctgacgggcaagttcatgagcacatcctccatcccgggctgc
ctgctgggcgtggcgctggagggcgacgccagcccccacggacacgcctccctgctacag
cacgtgctgctgctggaacaggcccggcagcagagcgccctcatcgcggtgccgctgcat
gggcagtccccgctggtgacaggggaacgcgtggccaccagcatgcggacggtgggcaag
ctcccgcggcaccggcccctgagccgcacccagtcctccccgctgccgcagagcccccag
gccctgcagcagctggtcatgcagcagcagcaccagcagttcctggagaagcagaagcag
cagcagctgcagctgggcaagatgctcaccaagaccggggagctgccgaggcagcccacc
acacaccctgaggagaccgaggaggagctgacggagcagcaggaggtcctgctgggggag
ggcgccctgcccatgccccgggaaggctccacggagagtgagagcacccaggaagacctg
gaggaggaggaggaggacgaggaagaggacgatgaggactgcatccaggtcaaggacgag
gagggcgagagcggcccggaggaggggcccgactcggaggagtccagtgctggctacaaa
aagctgttcccagatgcccagcagctgcagcccctgcaagtgtaccaggcgcccctcagc
ctggccgctgtgcctcaccaggccctgggccgcacccagtcctcacctgctgcccccggg
agcgtgaagagccccccagaccagcccaccaagcacctcttcaccacaggtgtggtttac
gacacgttcatgctgaagcaccagtgcatgtgtgggaacacgcacgtgcaccccgagcac
gctggccgcatccagagcatctggtcccggctgcaggagacgggcctgctcagcaaatgt
gagcggattcggggtcgcaaagctacgctggacgagatccagacggtgcactctgagtac
cacaccctgctctatgggaccagccccctcaaccggcagaagctggacagcaagaaactg
cttggccccatcagccagaagatgtacgccatgctgccttgtgggggcatcggagtggac
agtgacaccgtgtggaacgagatgcactcgtccagtgctgtgcgcatggcagtgggctgc
ctcgtggagctggccttcaaggtggccgcgggggagctcaagaatggatttgccatcatc
cggcccccaggacaccacgccgaggaatccacagccatgggattctgcttcttcaactct
gtagccatcacagccaaactcctgcagcagaagctgaacgtgggcaaggtcctcatcgtg
gactgggacattcaccatggcaatggcacccagcaggcgttctacaacgacccctctgtg
ctctacatctccctgcatcgctacgacaacgggaacttctttccaggctccggggctcct
gaagaggttggtggaggaccaggcgtggggtacaatgtgaacgtggcatggacaggaggt
gtggatccccccattggcgacgtggagtacctgacagccttcaggacagtggtgatgccc
attgcccacgagttctcacctgacgtggtcttagtctccgccgggtttgatgccgttgaa
ggacatctgtctccactgggtggctactctgtcaccgccagatgttttggccacttgacc
aggcagctgatgacgctggcagggggccgcgtggtgctggccctggagggaggccatgac
ttgaccgccatctgtgatgcctctgaggcctgtgtctcggctctgctcagcgtggagctg
cagcccttggacgaggctgtcttacagcagaagcccaacaccaacgcagtggccacacta
gagaaagccatcgagatccagagcaaacactggagctgtgtgcagaggtttgctgctggt
ctgggccggtctctgcgggaggcccaggcaggggagaccgaggaggcagagactgtgagc
gccatggccttgctgtcggtgggggcggagcaggcccaggccgccgccgccagggagcac
agccccaggtcggcagaggagcccatggagcaggagcccaccctgtga |
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