KEGG   Oryctolagus cuniculus (rabbit): 100359017
Entry
100359017         CDS       T03373                                 
Name
(RefSeq) mRNA export factor RAE1 isoform X1
  KO
K14298  mRNA export factor
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03013  Nucleocytoplasmic transport
ocu05014  Amyotrophic lateral sclerosis
ocu05164  Influenza A
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100359017
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    100359017
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100359017
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100359017
   03036 Chromosome and associated proteins [BR:ocu03036]
    100359017
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100359017
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100359017
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_SPT8
Other DBs
NCBI-GeneID: 100359017
NCBI-ProteinID: XP_008251273
Ensembl: ENSOCUG00000001585
UniProt: G1SFQ1
LinkDB
Position
Unknown
AA seq 380 aa
MKTRRGCDRRGKMSLFGTTSGFGTSGTSMFGSTTTDNHNPMKDIEVTSSPDDSVGCLSFS
PPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK
TAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ
LPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKP
TGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTL
ATVGSDGRFSFWDKDARTKLKTSEQLDQPIAACGFNHNGNIFAYASSYDWSKGHEFYNPQ
KKNYIFLRNAAEELKPRNKK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgaagacgaggaggggctgcgaccgcaggggcaagatgagtctgtttggaaccacctcg
ggctttgggaccagcgggaccagcatgttcggcagcacgacgaccgataaccacaacccc
atgaaggacatcgaggtgacgtcttctcccgacgacagcgtgggctgcctgtccttcagc
ccgccgaccttgccggggaacttcctcatcgcggggtcgtgggccaatgacgtccgctgc
tgggaggttcaggacagcgggcagaccatcccgaaagcccagcagatgcacaccgggccg
gtcctcgacgtctgctggagtgacgacgggagcaaagtgttcaccgcatcttgtgataaa
actgccaaaatgtgggacctcaacagcaatcaggcaattcagatcgcacagcacgatgct
cctgttaaaaccatacactggatcaaagcccccaactacagctgcgtgatgaccgggagc
tgggacaagaccctgaagttctgggatacgcggtcgtcaaaccctatgatggttctgcag
ctccccgagaggtgttactgtgcggacgtgatctacccgatggccgtggtggcgaccgcg
gagaggggcctgattgtgtaccagctggagaaccagccttccgagttccggaggatagag
tccccgctgaaacaccagcatcgatgtgtggctatttttaaagacaaacagaacaagcca
actggatttgctctgggcagtattgaggggcgagttgctattcactacatcaaccctccg
aatcctgccaaagacaacttcacctttaagtgtcatcgctccaacgggaccaacacgtca
gcgcctcaggacatctacgcggtcaatggcatcgcgttccatcccgttcacggcaccctg
gccaccgtggggtctgacggccgcttcagcttctgggacaaggatgccagaacaaaactc
aaaacttcagagcagttagaccagccgatagcagcctgcggcttcaaccacaacggcaac
atcttcgcctacgcctccagctacgactggtccaagggacatgagttctataatccccag
aagaaaaattacatcttcctgcgcaacgcggctgaagagctgaagcccaggaataagaag
tag

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