Oryctolagus cuniculus (rabbit): 100359105
Help
Entry
100359105 CDS
T03373
Name
(RefSeq) neuronal PAS domain-containing protein 4
KO
K26457
neuronal PAS domain-containing protein 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100359105
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100359105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
HLH
Motif
Other DBs
NCBI-GeneID:
100359105
NCBI-ProteinID:
XP_051710766
Ensembl:
ENSOCUG00000000905
LinkDB
All DBs
Position
1:207774835..207791333
Genome browser
AA seq
802 aa
AA seq
DB search
MYRSTKGASKARRDQINAEIRSLKELLPLAEADKVRLSYLHIMSLACIYTRKGVFFAGGT
ALEGPTGLLSAQELEDIVAALPGFLLAFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIY
DIIDPADHLTVRQQLTLHSALDTDRLFRCRFNTSKSLRRQSAGNKLVLIRGRFHAHPPGA
YWAGNPVFTAFCAPLEPRPRPGPGPGPGPASLFLAMFQSRHAKDLAILDISESVLIYLGF
EHSELLCKSWYGLLHPEDLAHASAQHYRLLTESGDIQAEMVVRLQAKSGGWAWIYCLLYS
EGPEGPITANNYPISDSEAWSLRQQLNSEDTLASYILGAPAMPPSFPENILSQEQCSSPN
PLFTPALGAPRSTSFPGAPELGVVSTSEELPQAPKEVDFRYLTFPSGPAPSLQADLSKDL
VCTPPYTPHQPGGCAFLFSLHEPFQTHLPAPSSSLQEQLTPSTVTFSDQLTPSSATFPDP
LTSPLQGQLTETPARSYEEQLTPCTSAFPDPLLPGTATFPEPLGSPAREQLTPPSTAFQA
HLSSPSQTFPEQLSPNPTKTYFAQEGCSFLYEKLPPSPSSPGNGDCTLLALAQLRGPLSV
DVPLVPEGLLTPEASPVKQSFFHYSEKEQHEIDRLIQQISQLAQGMDRPFSAEAGTGGLE
PLGGLEPLDSNLSLPGAGPPVLSLDLKPWKCQELDFLADPDSIFLEETPVEDIFMDLSTP
DPNGEWGSGDPEAEGPGGAPSPCNNLSPEDHSFLEDLATYETAFETGVSAFPYDGFTDEL
HQLQSQVQDSFHEDGSGGESTF
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctccaccaagggcgcctccaaggcgcgccgcgaccagatcaacgccgagatc
cgcagcctcaaggagctgctgccgctggccgaagcggacaaggtccggctgtcctacctt
cacatcatgagcctcgcctgcatctacactcgcaagggcgtcttcttcgctggaggcact
gccctggagggtcccacaggactcctctcagctcaagagcttgaagacatcgtggcagca
ctacctgggttcctgcttgcgttcacagccgaggggaagttgctgtacctgtctgagagc
gtgagcgagcacctgggccactccatggtggacctggttgcccaaggtgatagtatctac
gacatcattgacccagctgaccacctcaccgtgcgccagcagctcaccctgcactctgcc
ctggacactgatcgtctcttccgctgtcgcttcaacacctccaagtccctcaggcgccag
agtgcaggcaacaaactggtgctcattcgaggccgattccacgctcacccgcctggagcc
tactgggcaggaaaccccgtgttcacagctttctgcgccccactggaaccaagacctcgc
cctggccctggccccggccctggccctgcctcactcttcctggccatgttccagagccgt
cacgctaaagatctggccattttggacatctctgaaagtgtcctaatctacctgggcttt
gagcacagtgaactgctctgtaagtcgtggtacggactgctgcaccccgaggacctggcc
catgcgtctgcgcaacactaccgcctgttgactgagagtggagatattcaggcggagatg
gtggtgagactgcaggccaagtctggaggctgggcgtggatttactgcctgttatactca
gaaggtccggaggggcccattactgccaataactacccgatcagtgactcggaagcctgg
agcctccgccagcagctgaactctgaagacaccctagcgtcctacatcctgggcgccccg
gccatgccgccctcgttccctgagaacatcctctcccaggagcaatgctccagccctaac
ccgctcttcaccccagccttgggggctcccagaagcaccagcttccccggtgctcctgaa
ctgggcgttgtctccacatcagaagagcttcctcaagcccccaaagaggtggacttcaga
tacctgacgttcccttccgggcctgcgccttctctccaggcagacctgagcaaggacctt
gtgtgcacgccgccctacacgccacaccagcccggaggctgtgccttcctcttcagcctc
catgagcccttccagacccacttgcccgccccgtccagctctctccaagaacagctgact
ccaagcaccgtgaccttctcggaccagttgacgcccagcagtgcgaccttcccggaccca
ctcaccagcccactccaaggccagttgaccgaaaccccggccagaagctacgaggagcag
ctgactccttgcacctccgccttccctgacccgctgcttccgggcactgccaccttcccg
gagcccctgggcagccctgcccgtgagcagctgactcctcccagcacagcattccaagca
cacctgagcagccccagccagactttcccggagcaactgagccccaatcccaccaagact
tacttcgcccaggagggatgcagttttctctatgagaagttgcccccaagtcctagcagc
cctggtaatggggactgcacactcctggccctagcccagctccggggtcccctctccgtg
gatgtccccctggtgcccgaaggcctgctcacacccgaggcctccccagtcaagcagagc
ttcttccactactccgagaaagagcagcacgagatcgaccgcctcatccagcagattagc
cagctggctcagggcatggaccggcctttctcggcggaggctggcaccggcggactggag
ccactgggagggctggagcctctggactccaatctgtccctgccgggggctggccccccg
gtgcttagcctggacctgaagccctggaagtgccaggagctggatttcctggctgaccct
gatagcatattcctggaagagacgcccgtggaagacatcttcatggatctctccacccca
gaccccaatggggaatggggctccggggatcctgaggctgagggcccgggaggggcccca
tcgccttgcaacaacctgtccccagaagaccacagcttcctggaggacctggccacatac
gaaaccgcctttgagacaggtgtctcagcattcccctatgatgggtttactgatgagttg
catcaactccagagccaagttcaagacagcttccatgaagatggaagtggaggggaatca
acgttttga
DBGET
integrated database retrieval system
