Oryctolagus cuniculus (rabbit): 100359123
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Entry
100359123 CDS
T03373
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04022
cGMP-PKG signaling pathway
ocu04024
cAMP signaling pathway
ocu04740
Olfactory transduction
ocu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
100359123
04022 cGMP-PKG signaling pathway
100359123
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
100359123
04740 Olfactory transduction
100359123
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocu04040
]
100359123
Ion channels [BR:
ocu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100359123
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
100359123
NCBI-ProteinID:
XP_017197744
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Position
5:complement(13939221..14014677)
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AA seq
1215 aa
AA seq
DB search
MLGWVQKVLPQPPGTQRTKVEEEEEAEEAEPEPEPEPETAPEEAEPEDQALPPEETPAGP
LEGQEVAAADPSLQETQEAASIPPASLQAQGTGVLAVNSPSGWVLTWLRRGMEKVVPQPA
CSARAAQQEDPDQAGAQILGPCSAGDAGCPDEPSDALRAQDAGPGPWLLRWLEQNLEKVL
PQPPKASETQGWREEPADAAVDPEPPACPLGPEPRMQAQESASLPTPSGPEPQEEPAPEP
QPGFQASSLPPPGDPARLLAWLLHRLEMALPQPVLHQKAGGQEPDSPGTCDVQTISILPG
EQVEPDLVLEEVDPHWEDTQQDSSGSPQGTEEVPAYGEEDSAVEEVPRPLSQIQEEKEEE
EEEEDGEQEEEEEEEEADVLLDSYLVTEADEDPSEVGETQELRESDQELQEEATANSPGV
PGTREHPEVQVEDADTDSHPLIPEEAPPSVPSPSLPSPSLPPPSPAKADTLTVPGSASAA
PRKRLPSPDNEAEELRALSPAESPVVAWLASPTPQDTDAQDRAASAASQNSAIINDRLQE
LVRLFKERTEMVKEKLIDPDVTSEEESPQPSPAKKAPEPAPEAKPAEAQQAEEEHYCDML
CCKFKRRPWKKYQFPQSIDPLTNLMYILWLFFVVLAWNWNCWLIPVRWAFPYQTPANIHL
WLLTDYLCDLIYFLDITVFQMRLQFVKGGDIITDPKEMRNNYLKSRRFKMDVLCLLPLDF
LYLKFGVNPLLRLPRCLKYMAFFEFNDRLEAILSKAYVYRVIRTTAYLLYSLHLNSCLYY
WASAYQGIGSTHWVYDGVGNSYIRCYYFAVKTLITIGGLPDPQTLFEIVFQLLNYFTGVF
AFSVMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPRAVQNRVKTWYEYTWHSQGM
LDESELMVQLPDKMRLDLAIDVNYSIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVC
KKGEIGREMYIIQAGQVQVLGGPDGKAVLVTLKAGSVFGEISLLAVGGGNRRTANVVAHG
FTNLFILDKKDLNEILVHYPESQKLLRKKARRMLRSNNKPKEEKSVLILPPRAGTPKLFN
AALAAAGKMGKAGKGGKLAHLRARLKELAALEAAARQQQLLEQAKSSQDAAGGEAGTAAP
DQPVAPSEAAPDLPSAPEPHAPQAPPESPEKPEGGEEEAARPEEPSVQIRTSPGPESGEQ
ILSVEGPEEKKDEAE
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctgggtccagaaggtgctgccgcagcctccagggactcagaggaccaaggtg
gaggaggaagaggaagcagaggaggcggaaccggaaccggaaccagagcccgagacagcc
cccgaggaggccgagccggaggaccaggccctgccacctgaagagacacctgcagggcca
ttggaggggcaggaagtggctgcagctgacccaagccttcaagagacgcaggaggctgcc
tccattccgcccgcatccctccaggcccagggcacgggggtcctggcagtgaacagtccc
agcggctgggtgctgacgtggctcaggagaggcatggagaaggtggtcccgcagcctgcc
tgcagtgccagggcagcccagcaggaggacccagatcaggctggagcacagatccttggg
ccctgcagcgctggggacgcagggtgcccagatgagcccagcgacgccctcagggcccag
gacgccgggcctgggccgtggctgctcagatggctggagcaaaatctggagaaagtgctg
cctcagccgcccaaagcctccgagacccagggctggagggaggagcctgctgatgctgcc
gtggacccagagcctcccgcatgtcccctggggccagagcccaggatgcaggcccaggag
agcgcctccctgcccacgcccagcggcccggagccccaggaggagccggctccagagccc
cagcctgggttccaggcttcctccctgccgccccccggggaccctgccaggttgttagca
tggctcctgcacaggctggagatggccctgccgcagccagtgctccaccagaaagctggg
ggccaggagcctgactcccctgggacgtgtgacgtgcagaccatcagcatcctccctgga
gagcaagtggagcctgaccttgtcctggaagaggttgacccgcactgggaggacacccag
caggacagcagcggcagcccgcagggcacagaggaggtgccggcttacggagaagaggac
agtgccgtggaggaggtgcccaggccgctgtcccagattcaagaggagaaagaggaggag
gaagaggaagaggatggagagcaggaagaggaggaggaggaagaggaggctgacgtcctg
ctggatagctacttggtgacggaggcagatgaggaccccagtgaagtaggagaaacccag
gagctgagggagtcggaccaggagctgcaggaggaggccacggccaacagcccaggagtg
cccggcacgagagagcaccctgaagtgcaggtggaagatgcggacaccgacagccacccc
ctcatcccggaggaggccccgccctcggtgccatcgccctcgctgccgtcgccctcgctg
cccccgccctcgcccgccaaggccgacaccctcacggtcccaggctctgcctcggcggcc
cccaggaagaggctgccctctccggacaatgaggctgaagagctcagggcgctgtcacct
gccgagtccccggtggtggcctggttggcctctcccaccccacaggacactgatgcccag
gaccgcgcggcctccgccgccagccagaacagcgccatcatcaacgaccggctccaggag
ctggtgaggctcttcaaggagcgcacggagatggtgaaggagaagctcatcgaccctgac
gtcacctccgaggaggagagcccgcagccctccccagccaaaaaggccccggagccggcc
ccagaagccaagcccgcggaggcgcagcaggccgaggaggagcactattgtgacatgctg
tgctgcaagttcaaacgccgcccctggaagaagtaccagtttccccagagcatcgacccg
ctgaccaacctgatgtacatcctgtggctgttcttcgtggtgctggcctggaactggaac
tgctggctgatccccgtgcgctgggccttcccctaccagacgcccgccaacatccacctg
tggctgctgacggattacctgtgcgacctcatctacttcctggacatcacggtgtttcag
atgcgcctgcagtttgtcaaaggcggggacatcattacggacccaaaggagatgaggaac
aactacctgaagtcccgccgctttaagatggacgtgctctgcctcctgcccttggatttc
ctctacttgaagttcggcgtgaaccccctccttcgcttgccccgttgcttaaagtacatg
gccttcttcgagtttaacgaccgcctggaagccatcctcagcaaagcctacgtttacagg
gtcatcaggaccacagcctacctgctctacagcctgcacttgaactcctgtctttactac
tgggcgtccgcctaccagggcattggctccacgcactgggtctatgatggcgtgggaaac
agttacatccgctgctactactttgccgtgaagaccctcatcaccattggcgggctgccc
gacccccagacgctcttcgagattgtcttccagctgctgaattacttcactggggtcttc
gctttctctgtgatgattggacagatgagagacgtggtgggcgccgccacggcggggcag
acctactaccgcagctgcatggacagcacagtgaagtacatgaacttctacaagatcccc
agggccgtgcagaaccgcgtcaagacctggtacgagtacacctggcactcgcaaggcatg
ctggatgagtcagagctgatggtgcagctcccggacaagatgcggctggacctggccatc
gacgtgaactacagcattgtcagcaaggtggcgctctttcagggctgcgaccggcagatg
atcttcgacatgctgaagaggcttcgctccgtcgtctacctgcccaacgactacgtgtgc
aagaagggggagatcggccgtgagatgtacatcatccaggcggggcaggtgcaggtgctg
ggcggcccggatgggaaggctgtcctggtgacactgaaagctggatccgtgtttggagag
ataagcttgctggccgtcgggggcgggaatcggcgcacggccaacgtggtggcccacggg
ttcaccaacctcttcatcctggacaagaaggacctgaatgagatcttggtgcactatccc
gagtctcagaagttgctccggaagaaggccaggcgcatgttgaggagcaacaacaagccc
aaggaggagaagagcgtgctcatcctgcccccccgggcgggcacccccaagctcttcaac
gccgccctggccgcggcgggcaagatgggcaaggcggggaagggcggcaagctcgcccac
ctgcgggcccgcctcaaggagctggctgcgctggaggcggccgccaggcagcagcagctg
ctggagcaggccaagagctcacaagatgccgcggggggagaggcaggtaccgcagccccg
gaccagcccgtggctccctcggaggccgccccggacctgccctcagccccagagccccac
gcaccccaggcgcccccggaatcccccgagaagcccgagggaggtgaagaggaagcggcc
cggccggaggagccatcagtgcagatccgcacgagcccaggcccggagtccggcgagcag
atcctgtccgtggaggggccagaggagaagaaggacgaggcagagtga
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