Oryctolagus cuniculus (rabbit): 100359326
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Entry
100359326 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03440
Homologous recombination
ocu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100359326
03460 Fanconi anemia pathway
100359326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100359326
Enzymes [BR:
ocu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100359326
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
100359326
FA (Fanconi anemia) pathway
Downstream FA components
100359326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ARCH_RTEL1
F-box_4
Motif
Other DBs
NCBI-GeneID:
100359326
NCBI-ProteinID:
XP_051680677
Ensembl:
ENSOCUG00000006683
LinkDB
All DBs
Position
19:complement(25408124..25616651)
Genome browser
AA seq
1242 aa
AA seq
DB search
MSTMSSVGSEYTIGGVKINFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALL
CSALAWQQSLLNGKPVDEGSHKKAEEPLSCCCTCHSKTFTNNDMNQRTSRHFNSPSKLPS
ERSGASSTCQDSSEKNTLAAKLSAKKQASKSRDGNDDFQVDKKRIRPLETAQQIRKRHCF
EKEEIHLNAKVVSEETVTLNSPSEKINSFSPQNPPGYCSRCGCSTKQGSDQESSNTIKKD
QGGKSKRPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRKE
KCMELLDGKNGKSCYFYHGVHKMSDQHTLQTLQGMCKAWEIEDLVSLGKKLKACPYYTAR
ELVEDADIIFCPYNYLLDAQIRESMDINLKEQVVILDEAHNIEDCARESASYSVTEVQLR
FARDELDSLVNNNIRKKDHEPLRAVCYSLINWLEANTEHLVERDYESSCKIWSGKEMLLN
LHKMGITTATFPILQGHFSTVLQKEEKVSQIRGIEEAVEVPVISASTQVMLKGLFMVLDY
LFRQNSRFADDYKIAIQQTYSWINQTDISDKNGILVLPKNNKRSRQKAAVHVLSFWCLNP
AVAFSDINGKVRTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQLWVGTIGSGPS
GRNLCATFQHTETFEFQDEVGALVLSVCQTVSQGILCFLPSYKLLEKLKERWLYTGLWHN
LELVKTVIVEPQGGEKTDFDELLQLYYDAIKYKGGKDGALLVAVCRGKVSEGLDFSDDNA
RAVITIGIPFPNVKDLQVELKREYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHK
NDWGALILVDDRFGNNPSRYISGLPKWVRQQIQHHSTFESALESLAEFSKKHQKEIDVTR
KYVKDQESTLEVACLKDSAPAYLLDLASHLSPENPKEDDTEMCIQELQCPKKVTENPSLP
SGIISRKRGNDPVLLEESVQTRKEKRIISRSTSPTFGKQTNRVSWSNFHSLGQFVTGKIQ
TTTPELRSPKNCTSSPCTFKTENTENKTLLPLSDKPESSTPTVKTSFGSCPQSETIVSSV
KIEHHSRQPLSYEEALGLDTELPPVNEDAAHSTSGSASETEVEDESIYFTPELYDPVETD
EEDNEPIHTDKGSRLANNSNCILATDLLEIKTTKGMDSVIDKKXQDHPDTELNIEGGKID
DIDGNVKTSCVNELKLRNTHEIDLNNFQQSVSKNKGVSPGVK
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgagtactatgtcttcagtggggtctgagtatacaattggtggagtgaagattaacttt
ccttgtaaagcttacccctcgcagcttgctatgatgaattctattgtcagaggtttaaac
agtaaacaacattgtttgttggagagccccacaggaagtggaaaaagtttggccttactt
tgttctgctttagcgtggcaacaatctcttcttaatgggaagccagtagatgagggctca
cacaaaaaagctgaagaaccattgtcatgttgttgtacatgccactcgaagacttttaca
aacaatgacatgaaccaacgaacttcacgtcatttcaacagtccaagcaaactaccttct
gaaagaagtggagcttcatcaacttgtcaagactcttctgaaaaaaacacgttggctgca
aaattatctgccaagaaacaggcatccaaatccagggatggaaatgatgactttcaagta
gacaagaaaagaattcgacccttggaaactgcacagcagattagaaaacgtcattgtttt
gaaaaggaagaaattcatttgaatgcaaaagttgtttcagaagagaccgtaacacttaac
tctccatcagaaaagataaactccttttcaccacaaaatccccctggctactgctctagg
tgtggttgttccactaaacaaggaagcgatcaagagtcttcaaacaccattaagaaagat
caagggggcaaatccaagagacccaaaatatattttggaacacgcacacacaagcagatt
gctcagattactagagagctccggaggacagcgtactcaggggtcccgatgacgattctt
tccagcagggatcatacttgtgtccaccctgaagtagttggtaacttcaacagaaaggaa
aagtgcatggaattgctggatggaaaaaatggaaaatcatgctatttttatcatggtgtt
cataaaatgagtgatcaacacacattacagacactccaagggatgtgcaaagcctgggaa
atagaagaccttgttagcctggggaagaaactaaaggcgtgtccatattacacagctcga
gaactagtggaagatgccgatataatattttgtccatacaactatcttctagatgcacaa
ataagggaaagtatggatataaatctgaaggaacaggttgtcattttagatgaagctcat
aacattgaggactgtgctcgagaatcagcaagttacagtgtaaccgaagttcagctgcgg
tttgctagagatgaactagatagtctggtcaacaataatataaggaagaaagaccatgaa
cctctacgagctgtgtgctatagcctcattaattggttagaagcaaacactgaacatctt
gtagaaagggattatgaatcatcctgtaaaatatggagtggaaaggaaatgctcttaaat
ttacacaaaatgggcatcactactgctacttttcccattttgcagggtcatttttccact
gttcttcaaaaagaagaaaaagtctcacaaattcgtggaatagaggaggcagtagaagta
cctgttatcagtgcttcaactcaagttatgctcaaaggactttttatggtgcttgactac
ctttttaggcaaaatagcaggtttgcagatgactataaaattgctattcaacagacttac
tcctggataaatcagactgatatttcagataaaaatggcatcttggttctaccaaaaaat
aacaaacgttcaagacagaaagctgcagttcatgtgctaagcttttggtgcttaaatcca
gctgtggccttttcagatattaatggcaaagttaggacaattgttttgacatctggcaca
ttatcaccaatgaaatctttttcatcagaacttggtgttacatttactatccaactggag
gctaatcatgtcattaataactcacagctttgggttggtaccattggatcaggccccagt
ggtaggaatctctgtgctaccttccagcatactgaaacatttgagttccaggatgaagtg
ggagcacttgtgttatctgtgtgccagactgtgagccaaggaattttgtgttttttgcca
tcttacaagctattagaaaaattaaaagaacgttggctatacactggtttatggcataat
ctggagttggtgaagacagtcattgtagaaccgcaaggtggagaaaaaactgattttgat
gaattactacagctgtattatgatgcaatcaagtacaaaggaggaaaagatggagccctc
ctggtagcagtttgtcgtggtaaagtgagtgagggtctggatttctcagatgacaatgcc
cgtgctgtcataacaataggaattccctttccaaatgtgaaagatctacaggttgaacta
aagcgtgagtacaatgaccaccattcaaaattaagaggtctattacctggacggcagtgg
tatgaaattcaagcatacagggctttaaatcaggcccttggtagatgtattcgacacaaa
aatgattggggagctcttattctagtggatgatcgcttcgggaataacccaagtcgctat
atatctggacttcctaagtgggtaaggcagcagattcaacaccattcaacctttgaaagt
gcactagagtccttggctgaattttccaaaaaacaccaaaaagaaattgatgtaaccaga
aagtatgtgaaggaccaagagtctactcttgaagtggcctgtttaaaggacagtgcgcca
gcttacttactggatctggcaagtcatctatcaccagaaaatcctaaggaagatgacaca
gaaatgtgtatccaggaactacagtgccctaaaaaagttactgaaaacccatctctacca
agtggcatcatctccagaaagcgtggaaatgacccagtgttattggaagagtctgtacag
acaaggaaagagaaaaggatcatttcccgatctacaagcccaacgttcggcaagcaaacc
aacagagtcagctggtctaactttcattctttgggacagttcgttactggtaaaatacag
accacaacacctgagctcaggtcaccaaagaactgcacctctagtccttgtactttcaaa
acagaaaacacggaaaataaaactcttttgccactctctgataaacctgagtcctcaact
cctacagtaaaaacgtcatttggatcatgtcctcagtcagaaaccattgtttcttcagta
aagattgagcatcattccagacaaccactcagttatgaagaggccctgggtctggacact
gaattacccccagtaaatgaagatgctgcccattcaacttcaggtagcgcttctgagaca
gaagtagaagatgaatccatctattttacacctgaactttatgatcctgtagaaacagat
gaagaagacaatgagcctattcacactgataagggcagcagattggctaataattcaaat
tgcattttggctacagaccttttagaaattaaaactacaaaaggaatggattcagtcatt
gataagaaannacaggatcacccagacacagagttgaatattgaaggtggtaaaattgat
gacattgatggtaatgtaaaaacatcttgcgtaaatgaattgaaactgagaaatactcat
gaaatagatctaaacaactttcaacaatctgtttccaaaaataaaggtgtgagccctggt
gttaagtaa
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integrated database retrieval system
