Oryctolagus cuniculus (rabbit): 103346563
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Entry
103346563 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6C protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
103346563
03036 Chromosome and associated proteins [BR:
ocu03036
]
103346563
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103346563
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103346563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
UBA_HYPK
Motif
Other DBs
NCBI-GeneID:
103346563
NCBI-ProteinID:
XP_051695664
Ensembl:
ENSOCUG00000006122
LinkDB
All DBs
Position
Unknown
AA seq
1893 aa
AA seq
DB search
MEEKKKKKQEEKKKKESAQKKAADQKTKVPEPTKTCSSQPQPAGTSTSTSTSTVSSSNNG
KRACASGQQPAASRYLPREVPPRFRQQEQKQLLKRGQPLPTGTLTSASPAQAAGPAGASP
PPLPGASAQPPPSKLPADLGHSGLADHYESSRCGQQPTYRSEAGCSWDKVSLDRPDKEAW
EPESASECPADADPACSCAPENSSMATGSAPGSFPAHTKKTNGSNGTSGTLGQSPSSQSA
LGAGGANGDGGAARVWGVATGSSSGLAHCSVGGGDGKMDSMIGDGRSQNCWSAASASAGI
SLNLNPNANPAAWPVLGHEGTVATGSPSSVCSPVSAIGQTLGSQNGNPPGTLGAWGNLLP
QESTEPQPPTSQNVSLSAQPQNLNTDGPNNTNPTNSSPSPVNAMQTNGLPNWGVAVGLGA
IIPPPLQGLPGANGASVSQVGGGGGEGVSSAVWGLSPGNPATGSSSSGFSQGNGDTVNSA
LSAKQNGSSSAVQKEGSGGNAWDSGPPAGPGLLAWGRGSGNSGVGNIHSGAWGHPSRNAS
NGVSGEWGKTPTQHAGSDVSGKGSAGWESPMQPGGEHVSSWAKAASSGTTASDGSSEGSG
GHSEGGPGREGAEGRRRDKAVLDQGHVQLPRSDLDPRVLSNTGWGQTPVKQNTAWEFAES
PRCERKSDTGTEAWGCAAARPPDTGGKSEGPSADSTSTSAVSGWVSSPPAAVPATTGWAE
SGSKAPSAPGVWADAAGSAAVSSAAAAKSGHAWSGTVSQEDKSPTWAEPPKPKSQSWGDG
QRPSPAWSAGAGDWADSASALGHVAEGKKSGSGWDADSSRAGAGWGDTARPGAGGWGGGT
NAKGTPGTSWGECLKPPQQSWATKPQDSGVSGWGGAASAKQTVTGWTRPKDSSEATGWEE
PSPPSIRRKMEIDDGTSAWGDPSSYNNRTVSMWDRNNPAVQSSATAAAGSTAAATTSSAT
HRGDTPPPHQASSQLNRSPLLGPVSSGWGEMPSIHSKAESSWGEPPSPSTLVDNGTAAWG
KPPGSGSGWGDHAAEPAVTFGRAGAPAAAPALCKPASKSMQECWGSGGDDVSVGASQWED
EEGDVWNNAASQDSVSSSSSWGSASKKGLQKAMKTSAKQDEAWVVSRLIKQLTDMGFPRE
PAEEALRSNNMNLDQAMSALLEKKVDVDKRGLGVTDYNGMVPKALGCRPPISKESSVDRA
TFLDKDGGLVEEPTTSPFLPSPSLKLPLANSALPGQALGGVASGLGMQNLNSSRQIPSGN
LGVFGNSGTAQARTVQQPPQPPVQPLNPSQPSLRAQVPQFLSPQVQAQLLQFAAKTIGLN
PALLTSPVSPQHMTMLSQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQEQQVARTITNL
QQQIQQHQRQLAQALLMKQPPAPPPPLSLHPSAGKPAMDSFPPHPQAPGLPDLQTKEQQS
SPNTFASYPLAALAPNMSVGSMDVASGLSVKDPSQSQSRLPQWTHPSSMENLTGAASPLD
QNPSKHGAIPGGLSIGPPGKSSIDDSYGRYDLIPNSESPASPPVAVPHSWSRAKSDSDKI
SNGSSVSWPPEFHPGVPWKGLQNIDPESDPDVTPGSVPSGPSINTTIQDVNRYLLKSGGS
SPPSAQNARLPXSSAWPLRAGSGRRGSVGSSAPPPSVAGKLSDIKSTWSSGPASHAQASL
SHELWKVPRNTAAPTRPPPGLANPKPSSTWGASPLGWTSSYSGSAWSTDASGRASSWLVL
RNLTPQIDGSTLRTLCLQHGPLVTFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTT
ILAEFAGEDEVNRFLAQGQALPPTSGWQPSGGGGQARLGTAPWSAPCLGAKGSSELLWGG
LWGPPSADDARVVGSPTPLNTLLPGDLLSGESM
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagaaaagaagaagaaagaaagtgctcagaaa
aaggctgctgatcaaaaaaccaaagtgccagaacctactaagacctgttcaagccagccc
caacctgccggtaccagcaccagtacttccaccagcactgtctccagcagcaacaatggc
aaacgtgcgtgtgccagcggccagcagccagctgcatcccgctacctgcctcgtgaggtg
cctccacgcttccgccagcaagaacagaagcagctgttaaagaggggccagccattaccc
acagggactctgaccagcgcgagcccagcccaggctgctggacctgcaggggcaagccca
cctcccctccctggagccagtgctcagccgcctcccagtaagctcccagcagacctcggt
cacagtggactggcggatcactatgagagctcccgctgcggacagcagcccacttaccgg
agcgaagccggctgcagctgggataaagtgagcctggacaggcccgacaaggaggcgtgg
gagccggagtctgcgtcagaatgccctgcggacgctgaccctgcctgcagctgcgcccca
gagaacagtagcatggccacaggcagcgccccgggcagcttccctgcacacaccaagaag
acgaacggcagtaacggcaccagtggcacgctcgggcaaagcccttctagccagagtgcc
ctgggagcagggggagccaacggcgatggcggcgcggccagagtgtggggcgtagccacg
ggctccagctctggcctcgctcactgctctgtcggtggtggggatgggaagatggacagt
atgattggagatgggagaagccagaattgctggagtgctgccagcgccagcgctggcatc
agtctcaaccttaatcctaacgccaaccccgctgcctggcccgtgctcggacacgaagga
actgtggccacaggcagcccttccagtgtttgcagcccagtcagtgccataggtcaaacc
ctgggcagccagaacgggaacccaccaggcactttaggtgcttggggaaacttgctgccg
caagagagcacagagccacagccgcccacgtctcagaacgtgtccttgagcgcacaacct
cagaaccttaacactgatggaccaaataacactaaccccacgaactcctcaccaagccct
gtcaatgcaatgcagacgaacggactgccaaactggggtgtggctgttggcctgggggcc
atcatcccgccccccctgcaaggccttcctggtgctaatggggcctcagtctctcaagtc
ggcggaggtggaggtgagggagtgagcagtgctgtgtgggggctgtccccaggaaaccct
gccacagggagtagcagctctgggttcagtcagggcaatggagacactgtgaactcggcg
ctaagcgctaagcaaaacggatccagcagtgctgtgcagaaggaaggaagtggggggaac
gcctgggattcgggaccccccgctggtcctggactgcttgcctggggaaggggcagtggc
aacagtggcgttggcaatatccattcaggagcttggggccaccccagtcgaaacgcctcg
aatggcgtgagtggggagtggggaaagaccccaacccagcacgccggcagtgacgtcagt
gggaagggctccgcggggtgggagagccccatgcagcctggcggtgaacacgtgagctct
tgggccaaagccgcgtcttcaggaaccacggcaagtgacggcagcagcgagggttccggc
ggtcacagcgagggaggccccgggagggaaggagcggagggccgcaggcgagacaaggcg
gtcctggaccagggccacgtccagctgccacggagcgaccttgacccgagagttctgtcc
aacactggctggggacagactccggtgaagcagaacactgcctgggagtttgccgagtcc
cccaggtgtgagagaaagagcgacactggcacagaggcctggggctgcgcggcggctcgg
cccccagacacggggggcaagagcgaggggcccagcgcggacagcacgagtacctctgca
gtgtcgggctgggtcagctccccgcctgctgctgtgccggcaaccacgggctgggcggag
agcggcagcaaggcgccgagcgccccgggggtctgggcagacgccgcaggctctgctgct
gtcagtagtgctgctgccgccaagagcggccacgcttggagtgggaccgtgagtcaggag
gacaagtcgcccacctgggctgagcctcccaaacccaaatcccaaagctggggagacggg
cagagaccgagtccagcctggagcgcaggggcgggagactgggcagactccgcctccgcc
ctcggacacgtggcagagggcaagaaaagtgggtctggatgggatgctgacagtagcaga
gccggggccggttggggcgacaccgcgaggcccggggccggtggctggggcggtggcaca
aacgcgaaggggactcccggcacgagctggggagagtgtctcaaacctccccagcagagc
tgggccaccaaaccccaggacagcggcgtgagcggctggggaggggctgcttctgcgaaa
cagacggtgacggggtggacgaggccgaaggacagcagcgaggcgaccggctgggaggag
ccctcgccaccgtccattcgacgcaagatggaaatcgatgatggcacctccgcttggggg
gacccgagcagctacaacaacagaactgtcagcatgtgggacaggaacaacccggccgtc
cagagcagcgccacggccgcggccggcagcaccgccgcggccaccacgagcagcgccacg
cacaggggtgacacgccaccgccgcaccaggccagctcgcagctgaaccgatcgccgctg
ctggggccagtttcgtcgggctggggcgagatgcccagcatccactccaaggctgaaagc
tcctggggagagccgccctccccctccaccctggtggacaacggcaccgctgcgtggggg
aagcccccagggagcggcagcgggtggggggaccatgctgctgagcccgctgtgacgttc
ggaagagccggcgcccccgctgccgccccagccctgtgcaaaccagcttccaaatctatg
caagaatgctggggcagtgggggggacgacgtcagcgtcggtgccagccagtgggaggac
gaagagggcgacgtgtggaacaacgctgcttcccaggacagcgtctcctccagcagctcc
tggggcagtgcctccaagaaaggacttcagaaggccatgaagacctctgccaagcaggac
gaggcctgggtcgtgagccggctgatcaaacagctcaccgacatgggcttcccgagagag
ccagctgaagaggccttgaggagtaacaacatgaacctcgaccaggccatgagcgctcta
ctggaaaagaaggtggacgtggacaagcgtggcctgggagtgactgactacaatgggatg
gtcccaaaagccctcggctgccgcccacccatctccaaagagtcttccgtggaccgtgcc
acctttctggacaaggatggcggcctcgtggaagagcccacgacttcaccgtttttgcct
tccccaagcctgaagctccccctggcaaacagtgcactccccggtcaggccctgggtggg
gttgcctcagggctgggcatgcaaaacttgaattcttctagacagataccgagcggcaat
ctgggtgtgtttggcaacagcggaacagcacaagccaggaccgtgcagcagccgccacag
ccaccagtgcagcctctgaacccctcccagcccagtctccgtgctcaagtgcctcagttt
ctatcccctcaggttcaagcacagcttttgcagtttgcagcaaaaaccattggtctcaac
cctgcactactaacctcgccagttagccctcagcacatgacgatgctgagccagctctat
cagctgcagctggcataccaacgtttacagatccagcagcagatgctacaagcccagcgc
aatgtttccggacccatgcgacagcaggagcagcaagttgcgcgcacaatcactaatctg
cagcagcagatccagcagcaccagcgccagctggcccaggccctgctcatgaagcagccg
ccagcaccgccgccgcccctgtctctgcacccctctgcaggcaagccggccatggacagc
ttccccccccacccccaggctcccggcctacccgacctgcagaccaaagagcagcagtct
tcgcccaacaccttcgcttcttaccctctcgctgcactggccccgaacatgagcgtgggc
agcatggacgtggccagcggcttgtcggtgaaggacccgtcccagtcgcagtcacgcctc
cctcagtggacacaccccagctccatggagaacttgacgggtgccgcttctcctctggat
cagaacccgagcaaacacggtgctatccctggaggtctaagcattgggcctccgggtaag
tcctccattgacgactcttacggccggtacgatttaatcccaaacagtgagtcgccagcc
agcccgcctgtagctgttccccacagctggtcgcgcgccaaatccgatagtgataaaatt
tccaacggctccagcgtcagctggcccccagagttccaccccggcgtgccctggaagggg
cttcagaacatcgaccccgagagcgaccccgacgtcacccccggcagcgtgcccagcggg
ccgagcatcaacaccaccatccaggacgtcaaccgctacctcctcaagagtggagggtcc
tccccgccatcagcgcagaacgccaggctgcccnnctcgagtgcctggccgctcagagcc
ggctccggccgccggggctctgtcggcagctctgcaccgccccctagtgttgccggtaaa
ctgtcggacatcaaatcgacgtggtcctccggcccggcctcccacgcgcaagcctccctg
tcccacgagctgtggaaggtgcccaggaacaccgcggcacccacgaggccgcctcctggc
ttagccaatcccaagccttcctccacctggggcgccagccccctgggctggacgagctcc
tactcgggttccgcgtggagcaccgatgcctccggaagagcaagcagctggctcgtcctg
cgcaacctcacaccccagatcgacggctccactctgcggacgctgtgcctgcagcacggg
cctctcgtcaccttccacttgaacctgacccagggcaacgctgtggtccgctacagctcc
aaggaggaagccgccaaggcccagaagtctctgcacatgtgtgtgctgggaaacacgacc
atcttggcggagttcgcgggcgaagacgaagtgaaccggttcctagcccagggccaggct
ctgccgcccacctccggctggcaacccagcggcgggggaggccaggcgcgcctgggcacc
gccccctggagcgccccgtgcctgggcgccaaggggagcagcgagctgctctggggcggc
ctgtggggcccgcccagcgccgacgatgccagggtggtcggcagccccaccccgctgaac
acgctgctgcccggggacctgctcagcggggagtcgatgtag
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integrated database retrieval system
