Oryctolagus cuniculus (rabbit): 103347441
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Entry
103347441 CDS
T03373
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
103347441
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103347441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
103347441
NCBI-ProteinID:
XP_051712874
LinkDB
All DBs
Position
13:143400388..>143440366
Genome browser
AA seq
1959 aa
AA seq
DB search
MRGPLGTEEELPRLFAGEMENEEQMSEEEDGGLEGFEDFFPVEPVSLPKKKKSKKLKESR
SKGKRKKKEGSHDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKREKKAKRKRKEEEE
EENDDGCLKEPKSSGQLMAEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQVPQPVPIR
KAKTKEGKGPGVRKKIKSSKDAKKKGKGKKAAGLKFRFGGMGTKRKKGSSSEEEEREESD
FDSASIHSSSVRSECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDEDEEEEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFVVGLPGPDVEPGAPRPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPVYAKMEERFYRYGVKPEWMMVHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDSRVPKRLV
KKGKKLKEEKQEKPPDTPMVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMCQGQRPATPVPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREVIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQARASAEWQDELSDNQSEYSIG
SEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNA
IMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGL
SRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLVPDGPEGKKPAEVVSSDPNTPVPASP
AHLPPAPLGLPDKVEAPLGYVDEKELGVQKPKKPLEAQALPTALDRAESEDKHESSDSKE
RAREERPEETEKAQPSPEQPPKEEVLPDQEKALDRLELSLGHSRGDSSDFRPDSTKAEEK
EPSETQQNGDREDDEEGKKEDKSGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKPYDI
WHRRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEVHKGNYLEMKNKFLARRFKL
LEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANA
VLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQG
AFGSSQMYNNNFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgccggggagatggag
aacgaagagcagatgtcagaggaagaggatggtggccttgaaggcttcgaggacttcttc
cctgtggagcccgtgagcctccccaagaagaagaaatccaagaagctgaaggagagcagg
tccaaggggaagcggaagaagaaggaggggagccatgacgagctgtcggagaacgaggag
gatctggaagagaagtcggagagtgagggcagcgactactcccctaataagaagaagaag
aagaaactcaaggacaagagggagaaaaaagccaagcgaaaacggaaggaagaggaggag
gaggagaacgacgatggatgcttgaaggagcccaagtcctcggggcagctgatggccgag
tggggcctggacgacgtggactacctgttctcggaggaggactaccacacgctgaccaac
tacaaggccttcagccagttcctccggccgctcatcgccaagaagaaccccaagatcccc
atgtccaagatgatgaccgtcctgggcgccaagtggcgggagttcagcgccaacaacccc
ttcaagggcagctcggcggcggcggcggcagcggcagtggctgcggctgtggagacggtc
accatcgcccctccgctggccatcagcccccagcaggtgccccagcctgtgcccatccgc
aaggccaagaccaaggagggcaaggggcccggggtgaggaagaagatcaagagctccaaa
gacgccaagaagaagggcaagggcaagaaggcggccgggctcaagttccgcttcggaggg
atgggcaccaagaggaagaagggctcctcgagtgaggaggaggagcgggaggagtcggac
ttcgacagcgccagcatccacagctcctccgtgcgctccgagtgctctgcagccctgggc
aagaagagcaagaggaggcgcaagaagaagaggattgacgacggtgatggctacgagacg
gaccaccaggactactgtgaagtgtgccagcagggaggggagatcatcctatgtgacacc
tgccccagggcctaccacctcgtctgcctcgacccagagctggagaaggctcccgagggc
aagtggagctgcccgcactgtgagaaggaggggatccagtgggagcccaaggacgacgag
gacgaggaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacggcggcgagctgctctgctgcgacgcctgcccctcctcctaccacctg
cactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgtcccccgctgaagggcaaagtccagcggatcctgcactggcggtggacagagccc
cccgcccccttcgtggtgggcctgccgggacccgacgtggagccaggcgccccccggccc
aagcccctggagggcatccccgagagggagttcttcgtcaagtgggcggggctctcctac
tggcactgctcctgggtgaaggagctccagctggagctctaccacacggtgatgtatcgc
aactaccaaaggaagaatgacatggacgagccgccgcccttcgactacggctccggggac
gaggacggcaagagcgagaagaggaagaacaaggaccccgtgtacgccaagatggaggag
cgcttctaccgctacggcgtcaagcccgagtggatgatggtgcaccggatcctgaaccac
agcttcgacaaaaagggggacgtgcactacctgatcaagtggaaagacctgccctacgac
cagtgcacctgggagatcgacgacatcgacatcccctactacgacaacctgaagcaggcc
tactggggccacagggagctgatgctcggggaggactcgagggtgcccaagaggctggtg
aagaaaggcaagaagctgaaggaggagaagcaggagaagccgccagacacgcccatggtg
gaccccacggtcaagtttgataagcagccgtggtacatcgactccacgggcggcacgctg
cacccgtaccagctggagggcctgaactggctgcggttctcgtgggcccagggcaccgac
accatcctggccgacgagatggggctgggcaagacggtgcagacgatcgtgttcctctac
tccctgtacaaggagggccactccaaggggccctacctggtcagcgcgcccttgtctacc
atcatcaactgggagcgcgaattcgagatgtgggcgcccgacttctacgtggtcacctac
acgggcgacaaggagagccgctccgtgatccgcgagaacgagttctccttcgaggacaac
gccattcggagcgggaagaaggtgtttcgcatgaagaaagaagtgcagatcaagttccat
gtgttgctcacctcgtacgagctcatcaccatcgaccaggccatcctgggctccatcgag
tgggcctgcctcgtggtggacgaggcccaccggctcaagaacaaccagtccaagttcttc
agggtcttgaacagctacaagatcgattacaaactgctgctgacggggacccccctgcag
aacaacctggaggagctcttccacctgctcaacttcctgacgcccgagcggttcaacaac
ctggagggcttcctggaggagtttgctgacatctccaaggaggaccagattaagaagctg
cacgacctgctggggccgcacatgctacggcggctcaaggctgacgtcttcaagaacatg
ccggccaagaccgagctcatcgtccgcgtggagctgagccagatgcagaagaagtactac
aagttcatcctcacgcgcaacttcgaggcgctcaactccaaagggggcgggaaccaggtc
tcactgctcaacatcatgatggacttgaagaagtgctgcaaccacccctacctcttcccc
gtggccgccgtggaggcccccgtcctgcccaacggctcctacgacggcagctccctggtc
aagtcgtccgggaagctcatgctgctgcagaagatgctcaagaagctgcgggacgagggc
caccgcgtgctcatcttctcccagatgaccaagatgctggacctgctggaggacttcctg
gagtacgaaggctacaagtacgagcgcatcgacggcggcatcaccggggggctgcggcag
gaggcgatcgacagattcaacgcccctggggcccagcagttctgcttcctcctctcgacc
cgggcgggcggcctgggcatcaacctggccacggcggacactgtcatcatctacgactcg
gactggaacccgcacaatgacatccaggccttcagccgtgcccaccgcatcgggcagaac
aagaaggtgatgatctaccgcttcgtgacgcgggcctcggtggaggagcgcatcacgcag
gtggccaagcgcaagatgatgctgacgcacctggtggtgcggcccggcctgggctccaag
tcgggctccatgaccaagcaggagctggacgacatcctcaagttcggcaccgaggagctg
ttcaaggatgacgtggagggcatgatgtgtcagggccagaggccggccacgcccgtccct
gacgtccagtcctccaagggcggggccctggccgccagcgccaagaaaaagcatgggagc
acccccccaggcgacaacaaggacgtggaggacagcagcgtgatccactacgacgacgcg
gccatctccaagctgctggaccggaaccaggacgccaccgacgacacggagctgcagaac
atgaatgagtacctgagctccttcaaagtggcccagtacgtcgtgcgcgaggaggacggc
gtggaggaggtggagcgggaggtcatcaagcaggaggagaacgtggaccccgactactgg
gagaagctgctgcggcaccactacgagcagcagcaggaggacctggcccgcaacctgggc
aagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcgcaggaggaccaggct
cgcgcctccgcagagtggcaggatgagctctcggacaaccagtcggagtactccatcggc
tccgaggacgaagacgaggacttcgaggagaggccggagggccagagtggacggcggcag
tccaggaggcagctcaagagcgacagggacaagcccctgccacctctgctggctcgcgtc
ggcggcaacatcgaggtgctgggcttcaacgcccggcagcgcaaggccttcctgaacgcc
atcatgcgctggggcatgccgccgcaggacgccttcaactcccactggctggtgcgcgac
ctgcgggggaagagcgagaaggagttcagagcctatgtgtctctgttcatgcggcacctg
tgtgagccgggggctgacggggcggagaccttcgcggacggcgtgccccgggagggcctc
tccaggcagcacgtgctcacgcgcattggggtcatgtcactggttaggaagaaggtccag
gagttcgagcatgtcaacgggaagtacagcacccctgatctggtccccgacgggcccgag
ggcaagaagcccgccgaggtcgtctcctccgaccccaacacgccagtgcccgccagcccc
gcacacctcccgccggccccgctcggcctgccagacaaagtggaagccccgctgggctac
gtggacgagaaggagctgggggtgcagaagccaaagaagcccctggaagcccaggccctg
ccaactgccctggacagagcggagagcgaggacaagcacgagagctcggacagcaaggag
agagcccgggaggagcggccagaggagacggagaaggcccagccctccccggagcagccg
cccaaagaggaagtgcttcctgaccaggagaaggccctggacaggctggagctaagcctg
ggtcacagcagaggggacagcagcgacttcaggccagatagcaccaaggctgaggagaag
gagcccagcgaaacgcagcaaaacggggacagagaggacgacgaggagggcaagaaggag
gacaagagtgggaagttcaagttcatgttcaacattgcggacggcggcttcacggagctg
cacacgctgtggcagaacgaggagcgcgccgccgtgtcttcggggaaaccctacgatatc
tggcaccggcgccatgactactggctgctggccggcatcgtgacgcacggctacgcccgt
tggcaagacatccagaatgacccccggtacatgatcctcaacgagcccttcaagtccgag
gtccacaagggcaactacctggagatgaagaacaagttcctggcccgcaggttcaagctg
ctggagcaggcactggtcatcgaggagcagctcaggagggccgcgtacctcaacatgacc
caggaccccaaccaccccgccatggccctcaacgcccgcctggccgaggtggagtgcctt
gccgagagccaccagcacctgtccaaggagtccctggccgggaacaagcctgccaacgcc
gtcctgcacaaggtcctgaaccagctggaggagctgctgagtgacatgaaggcggacgtg
acgcgcctgccctccatgctgtcccgcatcccgccggtggccgcccgcctgcagatgtcg
gagcgcagcatcctgagccgcctgaccaaccgggccggggaccccaccatccagcagggt
gccttcggctcctcccagatgtacaacaacaactttgggcccaacttccggggccctgga
ccgggagggattgtcaactacaaccagatgcccctggggccctatgtgaccgatatctag
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