Oryctolagus cuniculus (rabbit): 103347895
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Entry
103347895 CDS
T03373
Name
(RefSeq) protocadherin beta-6
KO
K16494
protocadherin beta
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
103347895
Cell adhesion molecules [BR:
ocu04515
]
Cadherins
Protocadherins
103347895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
DUF6389
Motif
Other DBs
NCBI-GeneID:
103347895
NCBI-ProteinID:
XP_008253354
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Position
3:23114224..23118353
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AA seq
816 aa
AA seq
DB search
MAETKTQHKKRQVALLMVLLLLWEVGSEFMQYSVLEESESGTFVANLTKDLGLRMGELAA
RGARIVFKGNRQHLQLDPQTHDLLLNEKLDREELCGSAEPCVLPFQVLLENPLQFFQAAL
RVRDINDHAPEFPAREMVLKISEITVPGKVFPLKMAQDLDSGSNGLQNYTISSNAHFHVV
TRNRSDGRRLPELVLDKALDREEQPQLGLTLTALDGGSPPRSGTTKIKVLVLDSNDNAPQ
FAQERYEAQVPENSPLGSRVITVSARDSDAGSFGEVSYALFQVDDVNQPFEINEITGEVR
LRQTLDFEKSRIHHVDIEATDGGGLTGKCSLIVKVLDVNDNAPELTLSSLTSPIPENAPE
VIVAVFSVSDADSGHNQDVVCSIDDNLPFFLRPSVENFYTLVTDGALDREARAEYNITIT
VSDLGTPRLTTRHHVAVQVSDVNDNAPAFSQAAYTLLVRENNSPGLLIGSVSASDRDAGA
NAQVTYSLLPPPQQPDRDVAALVSVHADSGQLYALRALDYEALRAFEFGVRAADRGSPAL
SSEARVRVQLLDANDHAPAVLYPPANGSAACPELVPRAADAGYLVTKVVAVDGDAGQNAW
LSFELLKATEPGLFGVWAHSGEVRTARPLSERDAPRQRLLVLVRDHGEPPLSASVTLHVL
LVDGFSQPYLALPEAAAAAEAARPDSLTVQLVVALAAVSSLLVLSVLALVAARLCGASAG
GGAGGVGVGAGCAVGGGGGGGGGGGAGAEGRFPGPLLDVSGGGTLSHSYQYEVRLTGDAG
TGEFKFMKPISPNFPPQLSGSDVEERLSIRNSFPFS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacaaaaacgcagcacaagaaaaggcaagtggcactcctcatggtattgttg
cttttgtgggaggtgggctcagaattcatgcagtattctgtactggaagagtcagagagt
ggcacgtttgtggccaatttgacaaaggacctggggcttagaatgggagagctggctgca
cggggcgcccggattgttttcaaggggaacagacagcatctgcagcttgacccgcagacc
catgatttgctgctaaacgagaaactggaccgggaggagctgtgtggctccgctgagccc
tgcgtgctgcctttccaagtgctgctggagaaccctctgcagttttttcaggctgccttg
cgggtcagagatataaatgaccacgccccggagttccctgccagagaaatggtcctgaaa
atatcagaaattactgtgccaggaaaggtattccctttgaaaatggcacaggatttagac
agcggcagcaacggcctccagaactacaccatcagctccaatgctcacttccacgttgtc
actcgcaatcgcagtgacggcaggaggctcccggagctggtgctagacaaagcgttggac
cgtgaggagcagccccagctaggactgaccctcacggcgctggatggcgggtctccgccc
cggtcagggaccacgaagattaaggtactggtgttggacagcaatgacaacgccccgcag
tttgctcaggagcgctatgaggcacaggtgcctgagaacagccccctgggctctcgcgtt
attactgtttcagcgagggattcagatgcaggatcctttggggaggtgtcttatgcgcta
tttcaggtagatgacgtcaatcaaccgtttgaaataaatgaaatcacaggagaagttcga
ctgagacagactttggattttgaaaaatctcgaattcatcatgtggatattgaggccaca
gacggtgggggcctaacagggaaatgctcgttaatcgtcaaagtcctggatgtgaatgac
aacgcccccgagctgaccctgtcctcactcaccagccccatccctgaaaatgcgccagag
gtcatagtggcagtgttcagtgtttcagacgcagactccggacacaaccaagacgtcgtt
tgttctatagatgataatctccccttctttctaagaccatccgtagagaacttctacacc
ctggtaaccgatggagcgctggacagggaggccagggccgagtacaacatcaccatcacc
gtgtccgacctgggcacgcccaggctgaccacccggcaccacgtcgcggtgcaggtgtcc
gacgtgaacgacaacgccccggccttcagccaggccgcctacaccctgctggtgcgcgag
aacaacagccccgggctgctcatcggctccgtgagcgccagcgacagggacgcgggcgcc
aacgcgcaggtgacctactcgctgctgccgccgccacagcagcccgaccgggacgtggcg
gcgctcgtgtcggtgcacgcggacagcgggcagctgtacgcgctgcgcgcgctcgactac
gaggccctgcgcgccttcgagttcggcgtgcgcgccgccgaccgcggctccccggcgctg
agcagcgaggcgcgcgtgcgcgtgcagctgctggacgccaacgaccacgcgccggccgtg
ctgtacccgccggccaacggctcggccgcctgccccgagctggtgccgcgcgcggccgac
gcgggctacctggtgaccaaggtggtggcggtggacggcgacgcgggccagaacgcctgg
ctgtcgttcgagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacagc
ggcgaggtgcgcacggcgcggccgctgagcgagcgcgacgcgcccaggcagcggctgctg
gtgctggtgcgcgaccacggcgagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctggcgctgcccgaggcggcggcggcggccgag
gcggcgcggcccgactcgctcacggtgcagctggtggtggcgctggcggcggtgtcgtcg
ctcttggtgctgagtgtgctggcgctggtggcggcgcggctgtgcggcgcgagcgcgggc
gggggcgcgggcggtgttggtgtgggggcggggtgtgcggttggcggcggcggcggcggc
ggcggcggcggcggcgcgggtgcggagggccgcttcccggggccgctgctggacgtgagc
ggcggcgggacgctgtcacacagctaccagtacgaggtgcgcctgacgggcgacgctggg
accggggagttcaagttcatgaagcccattagccccaacttccctccgcagctctctggg
agcgacgtggaggaacgtctcagcattcggaacagcttcccattcagttaa
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