Oryctolagus cuniculus (rabbit): 103349007
Help
Entry
103349007 CDS
T03373
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103349007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
103349007
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103349007
mRNA degradation factors
5'-3' decay
Decapping complex
103349007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
103349007
NCBI-ProteinID:
XP_008258030
Ensembl:
ENSOCUG00000011593
UniProt:
G1T1K9
LinkDB
All DBs
Position
8:complement(75871715..75927177)
Genome browser
AA seq
603 aa
AA seq
DB search
MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF
VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEEC
QRIAELMKNLTQYEQLKACQGTGAGASPVLPSSGEGKEVDILRMLTKAKDEYTKCKTCPE
PKQITSSSAIHDNPNLIKPIPVKASETQQPCILRPSQTLDPEPQHLSLTALFGKQDRATS
SEAVEPPQALQAQQQHEKLPVRQGVVRSLSYEEPKRQSPPVEKQLCPAIQKLMVRGADLH
PWSELPESRPREEGSPRPAIPPGSPCTARAAHAPQSACRAQTLLEKLHSAPGPADKHDRG
TAAPAGPVAPGCSTALAAATPAKGVAQPQLLSFNGTLPPHTLGPQAHGKERATFPRQTGP
PSSTPASSPRVAAPPELLRKLQVVPQEQQLPVPTRPALAAKFPAAAQGSRTGKPLESWIN
KTTSGTEKQARFLQVASPPHIPATAAPALLLAPTVFAHCASAPPRERDGGLWPLGGHGPP
ATSSSLLVPLQSPEPLVGSSSPLTKLQLQEALLYLIQNDDNFLNIIYEAYLFSMTQAAVK
KAV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtggcggcaggcggcctggtgggaaaggggcgcgacatcagcctggcggcc
ctgcagcgccacgacccttatatcaaccgcatcgtggacgtggccagccaggtggctctg
tacaccttcggccatcgagccaacgagtgggaaaagactgatgtggaaggaaccttattt
gtttatacaagatctgcttctccaaagcatggattcaccattatgaataggctgagcatg
gagaataggacagaacccattactaaagacctggatttccaactccaggaccctttcctt
ctctacagaaatgccagattgtccatttatggaatttggttttatgataaggaagaatgc
caaagaattgcggagcttatgaagaacctgactcagtatgaacagttgaaagcctgccag
gggactggagcaggagcctccccagttctccccagctcaggggagggcaaggaagtggat
atcctacgcatgctcaccaaggccaaggatgagtacacgaagtgtaaaacctgtcctgag
ccgaaacagataaccagttcgtctgccatccatgacaaccccaatctcatcaaaccaatt
ccagtgaaagccagtgaaacccagcagccgtgcatccttcggcccagccagaccttagac
cctgaaccccaacacttatccttgacagctctgtttgggaagcaggacagagccacaagt
tcagaagccgtggagcccccacaggccctccaggcccagcagcagcacgagaagctccca
gtaaggcaaggggtcgtgcgctccctgtcctatgaggaacccaaaaggcagtcgccgccg
gtggagaagcagctctgtccagctattcagaaactcatggtccggggcgcagacctccac
ccatggtcagagctgcccgagagccggccccgtgaagagggaagcccccgtccggccatc
ccacctgggtcaccctgtaccgccagggctgctcatgctccacagagcgcttgcagagct
cagaccctgctggagaagcttcacagcgcgccagggccagcggacaagcatgaccgtggc
acagcagcccctgccgggccggttgcccccggctgcagcacagctctcgccgctgccacc
ccagccaagggcgtggcacagccgcaactgctatctttcaatggcaccctcccgccgcac
acgctaggacctcaggctcatgggaaagagcgggccacgttccctagacagacgggccct
ccctccagcaccccagcaagcagtccccgggtggcagcccctccggagctactgaggaag
ctgcaggtggtgccgcaggagcagcagctgcccgtgcccacccggccagccctggcagct
aagtttcctgcagcagctcagggctctcggactgggaagcccttggagtcctggatcaac
aagacgacatccggcacagaaaagcaggctcgtttccttcaggtcgcctcacctccgcac
atccccgccacggccgctcctgctctgctcctggcccccacggtgttcgcacactgcgcc
tctgccccgcccagggagagggacggtgggctctggcctctgggaggccacggaccgccc
gctacctccagcagcctcttggtgcccctgcagagcccggagcccctggtgggctccagc
agcccgctcaccaagctacagcttcaggaggccctgctgtacctcattcagaacgacgac
aacttcttaaatataatctacgaagcctatctcttcagcatgacgcaggcggccgtgaaa
aaggccgtgtga
DBGET
integrated database retrieval system
