Oryctolagus cuniculus (rabbit): 103349186
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Entry
103349186 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04082
Neuroactive ligand signaling
ocu04721
Synaptic vesicle cycle
ocu04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
103349186
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
103349186
04721 Synaptic vesicle cycle
103349186
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
103349186
Transporters [BR:
ocu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
103349186
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
103349186
NCBI-ProteinID:
XP_051707668
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Position
9:103357473..103395356
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AA seq
599 aa
AA seq
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MAANGSKVADGQIATEVSEAPVANDKPKTLVVKVQKKGAELPDRDTWKGRFDFLMSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAP
MFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNTDRCFSNYSIV
NTTNMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIAWVLVYFCIWKGVGWTGKVV
YFSATYPYVMLIILFFRGVTLPGAKEGILFYVTPNFRKLSDSEVWLDAATQIFFSYGLGL
GSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAASG
PGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRR
ELFIAAVCIISYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRF
YDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTPLTMGSYVFPKWGQGVGWLM
ALSSMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDLVRPENGPEQPQASSSASKEAYI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacggcagcaaggtggccgacgggcagatcgccacggaggtcagcgaggcc
cccgtggccaatgacaagcccaagaccctggtggtcaaggtgcagaagaagggggcggag
cttcccgacagggacacgtggaagggccgcttcgacttcctcatgtcctgtgtgggctac
gccatcggcctgggcaatgtctggaggttcccgtacctgtgtgggaagaatggaggcggg
gccttcctcatcccctacttcctgacactcatctttgctggagtcccgctcttcctgctg
gagtgctcgctgggccagtacacgtccatcggggggctgggcgtctggaagctggccccc
atgttcaagggcgtgggcctggccgcggccgtgctctccttctggctgaacatctactac
atcgtgatcatctcgtgggccatctactacctatacaactccttcaccacgacgctgcca
tggaaacagtgtgacaacccctggaacaccgaccgctgcttctccaactacagcatcgtc
aacaccaccaacatgaccagcgccgtggtggagttctgggagcgcaacatgcatcagatg
actgacgggctggacaagccaggccagatccgctggccgctggccatcaccctggccatc
gcctgggtcctggtgtacttctgcatctggaaaggtgtgggctggaccggaaaggtggtc
tacttctcggccacgtacccctacgtcatgctcatcatcctgttcttccgtggagtcaca
ctgcctggcgccaaggagggcatcctgttctacgtcacgcccaacttccgcaagctgtcc
gactccgaggtgtggctggacgcggctacgcagatcttcttctcctatgggctgggcctg
ggctccctgattgccctgggcagttacaactcgttccacaacaacgtgtacagggactcc
atcatcgtctgctgcatcaactcctgcaccagcatgttcgccggcttcgtcatcttctcc
atcgtgggcttcatggcccacgtcaccaagcggtccattgctgacgtggcggcctcaggc
ccggggctggcattcctggcgtacccggaggccgtgacccagctgcccatctctccgctc
tgggccatcctcttcttctccatgctcctgatgctgggcatcgacagccagttctgcacc
gtggagggcttcatcacggccctggtggacgagtaccccagactgctgcgcaaccgccgg
gagctcttcatcgccgccgtctgcatcatctcctacctgatcggcctctccaacatcacc
caggggggcatttacgtcttcaaactcttcgactactactccgccagcggcatgagcttg
ctgttcctcgtgttcttcgaatgcgtctccatctcctggttctacggtgtgaaccgtttc
tacgacaacatccaggagatggtgggctccaggccctgcatctggtggaagctgtgctgg
tccttcttcacccccatcatcgtggcgggcgtgttcctcttcagcgccgtgcagatgacc
cctctcaccatgggcagctacgtgttccccaagtggggccagggagtgggctggctcatg
gctctgtcctccatggtcctcatccccggctacatggcctacatgttcctcaccctgaag
ggctccctgaagcagcgcatccaggtcatgatccagcccagcgaggacctcgtgcgcccc
gagaatggccccgagcagccccaggccagcagctctgccagcaaggaggcctacatctag
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