KEGG   Oryctolagus cuniculus (rabbit): 103350728
Entry
103350728         CDS       T03373                                 
Name
(RefSeq) collagen alpha-1(XXV) chain
  KO
K24356  collagen type XXV alpha
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    103350728
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ocu00536]
    103350728
Glycosaminoglycan binding proteins [BR:ocu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103350728
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 103350728
NCBI-ProteinID: XP_017202855
Ensembl: ENSOCUG00000000201
LinkDB
Position
15:37194375..37710977
AA seq 713 aa
MLVKKHTGKGGGREPGPADASPAGQRCAAAGPQCAALAALLSVVAILSCLYLGVKTNDLQ
ARIAALESAKGAPSIPLLSDTEDQLKAMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGDSGPPGQPGPQGPPGPKGDKGEQGDQGPRGLPGFPTVAALHSNQI
LTVKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQ
KGSVGAPGIPGTNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGD
PGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGER
GEAGPPGRGERGEPGAPGPKGDHGDKGDSGALGPRGPPGPKGDQGATEIIDYNGNLHEAL
QGPPGPPGPQGLQGPKGEQGSPGIPGVDGEQGLKGSKGDMGDPGMPGEKGGIGLPGLPGA
NGMKGEKGDSGLPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNGVKGLKGEP
GQKGDRGPLGLPGASGLDGKPGSRGIDGPVGPHGPAGPKGERGEKGAMGEPGPRGPYGLP
GFPGPRGEKGDLGEKGEKVTSLPACACVTLLTLSALLLHLCDSFSCLVHPYPVLQKPTDA
SSEDSGLSQMKSAALLEIRGLSSIGEKISPDIQAIVFQLPDANSLKNMISWGY
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgctggtgaagaagcacacggggaaaggaggaggccgggagcccggaccggcggacgcg
agccccgcggggcagcgctgcgctgcggctggaccccagtgcgcggccttggcagccctc
ctgtcagtggtggccatcctgtcttgtctgtacctgggggtgaaaaccaatgacctccag
gcgcggatagccgctctggaatcggcgaaaggggccccttccattcctctgctgtctgat
accgaggatcagctcaaggccatggtgcaggagaaagtggagcgccttctggctcagaaa
tcctatgaacatatggctaaaataagaattgcaagagaagcaccttcagaatgcaactgc
ccagcaggccctccagggaaacgaggtaagaggggccgaagaggagactctggtcctcct
ggtcagcctggtcctcagggccctcctggtccaaaaggtgataagggagaacaaggtgat
caagggcctcggggtctgccaggcttccccacagtcgctgccctgcacagtaatcagatc
ctcaccgtcaagggtgaccaaggacaagcagggcctccaggacccccaggccctccaggc
ccaagagggccacctggggacacagggaaagatggtccccgtggaatgcctggagtaccc
ggtgaaccagggaaaccaggagaacaaggcttgatgggtcctctggggcctccaggacaa
aagggttcagttggagcacctggaattccaggaacaaatggacaaaagggtgagcctggg
ttgcctggagcagtgggacagaatggaataccagggccaaagggagaacctggagaacaa
ggagaaaagggagatgctggagagaatggccccaaaggtgatacaggcgaaaagggtgac
cctggatcatctgctgcaggaatcaagggagaacctggagaatctggtcgtccagggcaa
aagggtgaaccagggcttcctgggcttcctggacttccggggataaagggagaaccaggt
ttcattggtcctcagggggaaccaggcttaccagggttaccaggaaccaaaggtgaacgt
ggggaggcagggcctcctggaagaggtgagcgaggggagcctggagcccctggacccaag
ggtgaccatggagacaaaggggactctggagctctgggcccaagaggtccacccggtcca
aaaggggatcaaggagccaccgagatcatagactacaatggtaacctccatgaagcctta
cagggcccccctggacctccaggacctcaaggactacaagggccaaagggagagcaggga
tctccaggaatcccaggagtagatggagagcagggactcaaaggctcaaagggagacatg
ggcgacccaggtatgccaggtgaaaaaggaggaattggacttccaggattaccgggtgcc
aatggaatgaaaggagaaaaaggagactccggattgcctggtcctcagggtccttctatc
ataggcccaccaggcccaccaggtccccatggcccacccggccccatggggccccatgga
cttcctggaccgaagggtgaaccagggttaaatggtgttaaaggattgaagggtgaacca
ggtcaaaagggtgacagaggaccccttggtcttccaggagcatctggcttagacggaaag
ccaggatcccggggtatagatggtcctgtgggaccccatggccctgctggtcccaaagga
gaaagaggtgaaaaaggagctatgggagagcctggacccagagggccctacggcctacct
ggcttccctggtccacggggcgagaagggcgacctaggagaaaagggagaaaaggtgacc
tccctgccagcatgtgcctgtgtgactcttctcacgctgtctgctttgctgctgcacctg
tgtgattccttctcatgcctagttcatccctatcctgtgctccaaaaacccactgatgcc
tcatccgaggattcaggccttagccaaatgaagtcggcagcactgctggaaatcagggga
ctgtctagcataggagaaaaaatatccccagatatccaagctatagtctttcagttacct
gatgccaattctttgaaaaatatgatatcctggggttattga

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