Oryctolagus cuniculus (rabbit): 103351965
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Entry
103351965 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 30 kDa subunit
KO
K10741
replication factor A4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03030
DNA replication
ocu03420
Nucleotide excision repair
ocu03430
Mismatch repair
ocu03440
Homologous recombination
ocu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103351965
03420 Nucleotide excision repair
103351965
03430 Mismatch repair
103351965
03440 Homologous recombination
103351965
03460 Fanconi anemia pathway
103351965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocu03032
]
103351965
03400 DNA repair and recombination proteins [BR:
ocu03400
]
103351965
DNA replication proteins [BR:
ocu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103351965
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103351965
MMR (mismatch excision repair)
103351965
DSBR (double strand breaks repair)
HR (homologous recombination)
103351965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
SelB-wing_2
ZW10_C2
Motif
Other DBs
NCBI-GeneID:
103351965
NCBI-ProteinID:
XP_051683724
LinkDB
All DBs
Position
X:complement(92501748..92509628)
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AA seq
334 aa
AA seq
DB search
MGRSKNPSGSDGWNCCVLVADWLHRLHEDGCGALHNMSACSSRVKRQTSLWSPLTRAKPH
LSSAGAVLKMIKSEFGSHSCISAEGGASGGNDQPSDXGTMPVTMVRSRARXQQVIPCYVS
QLLASXVDNVFKIRRIEISQVSVMGIIRKVERAPNXILCKIDDMTXKPIPVWQSLGKNKV
KQEATVLPVGVYAKVFCVLQLFMGAKSLVVLKIHVLEDMNELTMHVLEMVSAYMMQNKAR
QGESXQNEDGYDVSCIWKEVLHSIHMCPHQEGKSVQELQTQLCGLSEKAIKEAIDYLATE
GRIYPTVDKEHFKSIKAAKASHCLKMFASGCELF
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaagcaaaaacccatcaggctccgatggctggaattgctgcgttctggtagct
gattggctccacaggttgcatgaagatggctgtggtgccctgcataatatgtcggcttgc
agctcacgggtaaagcgccaaaccagcctgtggagtcccctgacaagagccaagcctcat
ctctcctcagctggagctgtccttaagatgattaagagtgagtttggaagccacagttgc
atctctgctgagggaggagctagtggtggcaatgaccaaccatctgactgaggcacaatg
cctgttacgatggtgagatccagggcccggntccaacaggttataccttgttatgtaagc
cagctgctcgcctctnnggttgataatgtgttcaagattagacgaattgagatttcccag
gtttctgtcatggggataatcaggaaggtggagagggctccaaactaaattctctgcaaa
attgatgatatgaccnccaagccaatcccggtttggcagtcacttggtaaaaataaagtg
aagcaggaagctactgtgctgccagttggagtatatgccaaagtgttttgtgtccttcag
ttgttcatgggagcaaaaagccttgtagtattgaaaatccatgtcctggaggatatgaat
gagttaaccatgcatgttctggaaatggtcagtgcatacatgatgcagaataaagcccgc
caaggggaaagctgacaaaatgaagatggctatgatgtcagctgcatctggaaggaggtg
ctccactcgattcacatgtgtcctcaccaggaagggaagagcgtacaggagctgcagacc
cagctctgtggtctgagcgagaaggccatcaaggaagccattgattatctggccaccgag
ggtcgcatctatcccaccgttgacaaggagcattttaaatctattaaggcagcaaaagca
tctcattgtctgaagatgtttgcctctggctgcgagttattttga
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