KEGG   Oryctolagus cuniculus (rabbit): 103352132
Entry
103352132         CDS       T03373                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103352132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocu03041]
    103352132
   04121 Ubiquitin system [BR:ocu04121]
    103352132
Spliceosome [BR:ocu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    103352132
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    103352132
Ubiquitin system [BR:ocu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103352132
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 103352132
NCBI-ProteinID: XP_051710772
LinkDB
Position
1:207480018..207492336
AA seq 801 aa
MGSSKKHRGEKEAAGTTAAASTGGAAEQPPRHREHKKHKHRSGGGGSSGGERRKRSRERG
SERGSGRRGAEAEARSSAHGRDRSQAEPSERRVKREKRDDGYEAAAGSKTSSGDASSLSI
EETNKLRAKLGLKPLEVNAVKKEAGTKEEPVTADVINPMALRQREELREKLAAAKEKRLL
NQKLGKIKTLGEDDPWLDDTAAWIERSRQLQREKDLAEKRAKLLEEMDQEFGVSTLVEEE
FGQRRQDLYSARDLQGLTVEHAIDSFREGETVILTLKDKGVLQEEEDVLVSVNLLDKERA
EKNVELRRKRPAYLPYADESVDDLAQQKPRSVLSKYDEELEGERPRSFRLEQGGTADGLR
ERELEEIRAKLRLQAQSLSTAGPRVASEYLTPEEMVTFKKTKRRVKKIRKKEKEVVMRAD
DLLPLGDQSQDGDFGSRSRGRGRRRVPETEEEAPGEEEEKEPVPPLPPSDDARVENMDIS
DEEEGAPPPGSPVLEEDEAELELQKQLEKGRRLRQLQQLRDSGEKVVEIVRKLESRQRGW
EEDEDPERKGAIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERDEERSAHGGSESD
GEENIGWSTVNLDEEKQQQDFSASSTTILDEEPIVNRGLAAALLLCQNKGLLETTVQKVA
RVKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVDETGRK
LTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQEKQKAQ
KTPYIVLSGSGKSMNANTITK
NT seq 2406 nt   +upstreamnt  +downstreamnt
atggggtcgtcaaagaagcaccgtggggagaaggaggccgccgggacgacggcggcggcc
agcactgggggcgccgccgagcagccgccgcgccatcgggagcacaagaagcacaaacac
cggagtggaggcggcggcagcagcggcggcgagcgacggaagcggagccgggagcgcggg
agcgagcgcgggagcgggcggcgcggggccgaggccgaggcccgcagcagtgcgcacggg
cgggatcgcagccaggccgagccctcggagcggcgcgtgaagcgggagaagcgcgatgac
ggctacgaggccgctgccggctccaaaaccagctccggagatgcctcgtctctcagcatc
gaggagaccaataaactccgggcgaagctggggctgaaacccttggaggtcaatgccgtg
aagaaggaggcgggcaccaaggaggagcccgtgacagccgacgtcatcaaccccatggcc
ttgcggcagcgcgaggagctgcgggagaagctggccgctgccaaggagaagcggctgctg
aaccagaagctggggaagataaagacgctgggggaggacgacccctggctggacgacacg
gcggcctggatcgagaggagccggcagctgcagcgggagaaggacctggcggagaagagg
gccaagctgctggaggagatggaccaggagtttggcgtcagcaccctggtggaggaggag
ttcgggcagaggcggcaggacctgtacagcgcccgggacctgcagggcctcaccgtggag
cacgccatcgactccttccgggagggcgagactgtgatcctcaccctcaaggacaaaggc
gtgctgcaggaggaggaggacgtgctggtgagcgtgaacctgctggacaaggagcgggcg
gagaagaacgtggagctgcgcaggaagaggcccgcctacctgccgtacgcggacgagagc
gtcgacgacctggcccagcaaaagcctcgttctgtcctgtccaagtacgacgaggagctc
gagggcgagcggccgcgctccttccgcttggagcagggcggcacggccgacggcctgcgc
gagcgggagctggaggagatccgggccaagctgcggctgcaggctcagtccctgagcacg
gcggggccgcgcgtcgcctccgagtacctcacgcccgaggagatggtcaccttcaaaaag
accaagcggagggtgaagaaaatccggaagaaggagaaggaggtggtgatgcgggcggat
gacctgctgcccctgggggaccagagtcaggacggggacttcggctccaggtcacggggc
cggggtcggcgccgagtgcctgagacagaggaggaggccccgggggaggaggaggagaag
gagccggtgcccccgctgccgccgtcggacgacgcgcgcgtggagaacatggacatcagt
gacgaggaggagggcgccccgccccctggctccccggtgctggaggaggacgaggccgag
ctggagctgcagaagcagctggagaaggggcggcggctgcggcagctgcagcagctgcgg
gacagcggcgagaaggtggtggagatcgtgaggaagctggagtctcggcagcggggctgg
gaggaggacgaggaccccgagcgcaagggcgccatcgtgttcaacgccacctccgagttc
tgccgcaccctgggcgagatccccacctacgggctggccggcaaccgcgaggagcaggag
gagctcatggactttgagcgagacgaggagcgctcagctcacggcggctccgaatccgac
ggggaggagaacattggctggagcacggtcaacctggacgaggagaagcagcagcaggac
ttctctgcctcctccaccaccatcctggacgaggagcccatcgtcaacagaggcctggcc
gctgccctgctcctgtgtcagaacaaagggctgctggagaccacggtgcagaaggtggcg
cgggtgaaagcacccaacaagtccctgccctcggccgtgtactgcatcgaggacaagatg
gccatcgatgacaagtacagccggcgggaggagtaccggggcttcacccaggacttcaag
gagaaggacggctacaagccagacgtgaagatcgagtacgtggacgagacgggccggaag
ctcacgcccaaggaggctttccggcagctgtcccaccgcttccacgggaagggctcgggc
aagatgaagacggagcggcggatgaagaagctggacgaggaggcgctcctgaagaagatg
agctccagcgacacgccgctcggcaccgtggcgctgctgcaggagaagcagaaggcccag
aagacgccctacatcgtgctcagcggcagcggcaagagcatgaacgcgaacaccatcacc
aagtga

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