Oryctolagus cuniculus (rabbit): 108176476
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Entry
108176476 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-17-like
KO
K16494
protocadherin beta
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
108176476
Cell adhesion molecules [BR:
ocu04515
]
Cadherins
Protocadherins
108176476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
108176476
NCBI-ProteinID:
XP_051700318
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Position
3:23118489..23130875
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AA seq
812 aa
AA seq
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MATPLPEALQKRQVTAITFLLLLWGAGSATLKYSVLEERESGFFVANLAKDLGLGEGELA
ARGARILSKGNKQHLQLEPKSGNLLVKEQMDREELCGDTDPCILHFQVLLKNPVQFIQGE
LQLQDVNDHAPEFLENETLLKILESSHAGSLFPLKIAQDPDVGSNTVQTYTISTNSHFHL
FTRNHSDGRKYPELELYKALDREAQPEFRLTLTALDGGSPPRTGTSQVLILVLDVNDNAP
EFAQQLHHVQVPENSPIGALITTVSARDVDAGTYGELSYSFFQSSNQIMQAFEINTATGE
IRLKRLLDFEETQSYRMEIEASDGGGLSGKCTVAIDVIDVNDNAPELTMSVLTTDIPENS
PQTVVAVFGISDPDSGDSGKMVCSIEEDLPFLLKPTLENFYTLVTDGALDRETRAEYNIT
ITVSDLGTPRLTTRHHVAVQVSDVNDNAPAFSQAAYTLLVRENNSPGLLIGSVSASDRDA
GANAQVTYSLLPPPQQPDVAALVSVHADSGQLYALRALDYEALRAFEFGVRAADRGSPAL
SSEARVRVQLLDXNDHAPAVLYPPANGSAACPELVPRAADAGYLVTKVVAVDGDAGQNAW
LSFELLKATEPGLFGVWAHSGEVRTARPLSERDAPRQRLLVLVRDHGEPPLSASVTLHVL
LVDGFSQPYLALPEAAAAAEAARPDSLTVQLVVALAAVSSLLVLSVLALVAARLCGAGAG
AGAGGVGVGAGCAVGGGGGGAGGEGRFPGPLLDVSGGGTLSHSYQYEVRLTGDAGTGEFK
FTKPVLSNFLGERVDMNTEEDSNFRNHLALGI
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgctccccgaagcgctgcagaaaaggcaagtgaccgccattacgttctta
ttactattgtggggggcgggcagcgcgaccctgaagtattctgttctggaagagagggag
agtggctttttcgtggccaacctagcaaaagatctggggctgggagaaggggagctggcc
gcgcggggcgcccggattctttccaaagggaacaaacagcacttgcagctggaaccgaag
agtggaaatttgctcgtcaaagaacaaatggaccgggaggagttgtgtggtgacacggat
ccatgtatactgcacttccaggtattgctgaaaaacccagtgcagtttattcaaggtgaa
ctacagctgcaagatgtaaatgatcatgctccagaattcttggaaaatgaaaccctcctc
aaaatcttggaaagcagccacgctgggtctctgtttcctttgaaaatagctcaagatccg
gatgtgggtagcaacacggttcagacctacacaatcagcaccaattcccatttccacctt
ttcacccgcaatcacagcgatggccggaaatacccggagctggagctgtacaaagccctg
gacagggaggcgcagccagagttcaggttaaccctcacagcgctggacggcgggtcaccg
cccaggacggggacttcgcaggtcctcatcctagtcctagacgtcaatgacaacgccccc
gagtttgctcagcagctgcaccatgtgcaggtcccagagaacagccccataggtgccctc
atcaccactgtgtccgctagagacgtggacgctgggacatacggcgagctctcctactca
ttttttcaatcctcaaatcaaatcatgcaggcctttgaaataaatacagccacaggagaa
atcagattaaaaagactactggattttgaggaaactcagtcttaccgaatggaaattgaa
gcctcagacggcggaggtctctcaggaaaatgcactgtggccatagacgtgatagacgtg
aatgacaacgcccccgagctgaccatgtcagtactcaccacggacatccccgaaaactcc
ccgcaaaccgtggtcgctgtgtttggaatatcagatccagactcaggagacagtggaaaa
atggtgtgctccattgaagaagatctcccctttcttctgaaaccgaccttagaaaatttc
tacactctagtaaccgatggagcgctggacagggagaccagggccgagtacaacatcacc
atcaccgtgtcggacctgggcacgcccaggctgaccacccggcaccacgtcgcggtgcag
gtgtccgacgtgaacgacaacgccccggccttcagccaggccgcctacaccctgctggtg
cgcgagaacaacagccccgggctgctcatcggctccgtgagcgccagcgacagggacgcg
ggcgccaacgcgcaggtgacctactcgctgctgccgccgccacagcagcccgacgtggcg
gcgctcgtgtcggtgcacgcggacagcgggcagctgtacgcgctgcgcgcgctcgactac
gaggccctgcgcgccttcgagttcggcgtgcgcgccgccgaccgcggctccccggcgctg
agcagcgaggcgcgcgtgcgcgtgcagctgctggacngcaacgaccacgcgccggccgtg
ctgtacccgccggccaacggctcggccgcctgccccgagctggtgccgcgcgcggccgac
gcgggctacctggtgaccaaggtggtggcggtggacggcgacgcgggccagaacgcctgg
ctgtcgttcgagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacagc
ggcgaggtgcgcacggcgcggccgctgagcgagcgcgacgcgcccaggcagcggctgctg
gtgctggtgcgcgaccacggcgagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctggcgctgcccgaggcggcggcggcggccgag
gcggcgcggcccgactcgctcacggtgcagctggtggtggcgctggcggcggtgtcgtcg
ctcttggtgctgagtgtgctggcgctggtggcggcgcggctgtgcggcgcgggcgcgggc
gcgggcgcgggcggtgtcggtgtgggggcggggtgtgcggttggcggcggcggcggcggc
gcgggtggcgagggccgcttcccggggccgctgctggacgtgagcggcggcgggacgctg
tcgcacagctaccagtacgaggtgcgcctgacgggcgacgctgggactggggagttcaag
ttcacgaaacctgtactttctaacttcctaggagagagggtggatatgaacactgaggaa
gactctaactttaggaatcatttggcattaggaatctaa
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