Oryctolagus cuniculus (rabbit): 108176477
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Entry
108176477 CDS
T03373
Name
(RefSeq) protocadherin beta-12
KO
K16494
protocadherin beta
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
108176477
Cell adhesion molecules [BR:
ocu04515
]
Cadherins
Protocadherins
108176477
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
108176477
NCBI-ProteinID:
XP_051700319
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Position
3:23158370..23211853
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AA seq
811 aa
AA seq
DB search
MEDRGAGAQRTRQVVLLFVVLGMAQAASEPGRFSVAEEVHSGSCVGNLAKDLGLEVGELS
FREARVVSNDNKQPLRLDTDTGDLILRETLDREELCGSTEPCVLHFQVIMKNPLQFLRIE
LQVMDINDHSPVFLEKEMLLEIPETSPVGAVFLLERAQDLDVGINAVNSYTISPNSHFHL
KMRVYPDSGKYPELVLDKALDYEEQPELSFTLTALDGGSPPRSGTALVRVVVVDTNDNSP
EFEQPFYEVKIPENSVLGSPVVTASAWDSDSGTNGEISYTFSHASEDIRKTFAINRKSGE
VTLTGPLDYETTQSYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSISGPIPENA
PETVVMVFSIRDRDAGDNGKMVSSIPEDLPFVLKSSFANYYTLETDAALDREARAEYNIT
ITVSDLGTPRLTTRHHVAVQVSDVNDNAPAFSQAAYTLLVRENNSPGLLIGSVSASDRDA
GANAQVTYSLLPPPQQPDVAALVSVHADSGQLYALRALDYEALRAFEFGVRAADRGSPAL
SSEARVRVQLLDANDHAPAVLYPPANGSAACPELVPRAADAGYLVTKVVAVDGDAGQNAW
LSFELLKATEPGLFGVWAHSGEVRTARPLSERDAPRQRLLVLVRDHGEPPLSASVTLHVL
LVDGFSQPYLALPEAAAAAEAARPDSLTVQLVVALAAVSSLLVLSVLALVAARLCGAGAG
AGAGGVGVGAGCAVGGGGGGAGAEGRFPGPLLDVSGGGTLSHSYQYEVRLTGDAGTGEFK
FMKPVSPNFPPQLTGSDVEERLSIRNSFPFS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccgaggggcaggcgctcagcggaccaggcaagtcgtgcttctctttgttgtg
ctgggaatggctcaagctgcctctgagcctgggcgcttttcggtggccgaggaagtgcac
agtgggagttgtgtgggcaatttggcaaaggacctgggcctggaggtgggtgagctctcc
ttccgggaagctcgggtggtctctaacgataacaagcagcctttgcggctggacacagac
accggggatttgatcctccgcgaaactctcgaccgggaggagctctgcggctccacggag
ccctgtgtgctgcacttccaggtgataatgaaaaatcctttgcagtttttacggattgag
cttcaggtcatggatataaatgaccactctcccgtcttcttagaaaaagaaatgctcctg
gaaatcccagaaactagccctgttggtgccgtgttcttactagagagggcacaggattta
gatgttggaatcaacgctgtgaacagctacacgataagccccaactctcatttccacctt
aaaatgagagtctatccagacagtgggaaatacccagagttagtcctggacaaggcgctg
gattacgaagagcagcccgagctcagcttcaccctcacggctctggatggcgggtctccg
cccaggtccgggactgccctcgttcgcgtggtggtcgtggatactaacgacaactccccc
gagtttgagcagccattctacgaggtgaagattccggagaacagcgtccttggctccccg
gttgtcactgcctcggcttgggattccgactcgggaacaaacggagaaatatcctatacc
ttctcccatgcctcagaagatattcgcaagacgtttgccattaatcgaaaatctggagaa
gttactctaacaggaccattagattatgaaacaactcaatcatactcaatcatcattcaa
gccacagatgggggtggactctttgggaaatccacagtcagaattcaggtaatggatgtg
aatgacaacgctcctgagatcaccgtgtcctcaattagcggcccaattccagaaaatgcg
cctgagactgtggttatggtctttagtatccgagacagagacgctggggacaatgggaag
atggttagttccatcccagaggacctgccattcgtgttaaagtcttcatttgcgaattac
tacaccttggagacggatgcagccctagacagggaggccagggccgagtacaacatcacc
atcaccgtgtccgacctgggcacgcccaggctgaccacccggcaccacgtcgcggtgcag
gtgtccgacgtgaacgacaacgccccggccttcagccaggccgcctacaccctgctggtg
cgcgagaacaacagccccgggctgctcatcggctccgtgagcgccagcgacagggacgcg
ggcgccaacgcgcaggtgacctactcgctgctgccgccgccacagcagcccgacgtggcg
gcgctcgtgtcggtgcacgcggacagcgggcagctgtacgcgctgcgcgcgctcgactac
gaggccctgcgcgccttcgagttcggcgtgcgcgccgccgaccgcggctccccggcgctg
agcagcgaggcgcgcgtgcgcgtgcagctgctggacgccaacgaccacgcgccggccgtg
ctgtacccgccggccaacggctcggccgcctgccccgagctggtgccgcgcgcggccgac
gcgggctacctggtgaccaaggtggtggcggtggacggcgacgcgggccagaacgcctgg
ctgtcgttcgagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacagc
ggcgaggtgcgcacggcgcggccgctgagcgagcgcgacgcgcccaggcagcggctgctg
gtgctggtgcgcgaccacggcgagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctggcgctgcccgaggcggcggcggcggccgag
gcggcgcggcccgactcgctcacggtgcagctggtggtggcgctggcggcggtgtcgtcg
ctcttggtgctgagtgtgctggcgctggtggcggcgcggctgtgcggcgcgggcgcgggc
gcgggcgcgggcggtgtcggtgttggggcggggtgtgcggttggcggcggcggcggcggc
gcgggtgctgagggccgcttcccggggccgctgctggacgtgagcggcggcgggacgctg
tcgcacagctaccagtacgaggtgcgcctgacgggcgacgctgggaccggggagttcaag
ttcatgaagcccgttagccccaacttccctccgcagctcactgggagcgacgtggaagaa
cgtctcagcattcggaacagcttcccattcagttaa
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