Oryctolagus cuniculus (rabbit): 127486210
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Entry
127486210 CDS
T03373
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
127486210
Enzymes [BR:
ocu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
127486210
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
127486210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
AAA_35
Motif
Other DBs
NCBI-GeneID:
127486210
NCBI-ProteinID:
XP_051685947
LinkDB
All DBs
Position
Unknown
AA seq
1346 aa
AA seq
DB search
MAGAAPGAAAGAARLATPATPATPAAGRVVQGERARGAAKMLEVLVLKVEDPDCFWVIIK
GCSPFLDHEVDYQKLNSAMNDFYNSMCKDIEIKPLMLEEGQVCVVYCPELRCWCRAVIKS
IMSSADHYLAECFLVDFARYIPVKSKNIRVAVESFMQLPYRAKKFRLYCMKPVTLHIDFC
EDSAEIVPAKKWDSAAVQYFQNVLKATTQVEAKLCAVEEDTFEVYLYVTIKNEKVCVNDD
LVAKNFACYVSPMEKQQLDSVEKPRLNMNSASSKKLNPALTLWPMFLQGKYFQRMEDSHG
LNLLTHSLQHTRCKDVVGDLEPTAAVLDKDVNCNMDSLRDSPKKKSEKKQQCLSLKDENK
CIESSAYWPTKRGITIYADPDIPATSASSQKPNEKPLCLAEKKDYDEKNGCVKLLQFLNP
DPLRADGISDLQQLQKLKSAVQPPVAVLWNRIEPCLTIDTSPLSADLKKTLQRNKYPGPS
HTESYSWPPIARGCDVVVISHCGNDPLLYLPPVLTILQTGGCYKSLPSRNGPLAVIVCPG
WKKAQLTFELLEDYSKSSRPLHPMLLTIGLHKDEAKNLKLPRGCDVIVTTPQSLLRLLTD
QSLLFLRLCHLVLDEVEVLFSEANEQMLAILDNFKKNIDVEERESAPHQIVAVGVHWNKH
IAHLIREFLNDPCVVITAMEEAALYGNVQQVVHLCLESGKTSTLLQVLDFIPSQTQKTLI
FTCSVAEADMVSKVVESNSIFCLKMHKEMVFNLKSVLEQWKKRLSSGSHIVLALTDDCIP
LLAITDATCVIHFSFPSSPKVFGGRLYCMSDHFQNLTEQGSPAEQGDRKTKSVLLLTERN
ASHAMGVLRYLERADAKVPSELYEFTAGVLEAKEDKKATSPLCPYLKAFGFCKDQRICPD
RHHINPEMDMPRKLSNQALPVSGYIKVIPFYVSNATNYFGRIIDKYLDLFATLNAEMNEY
FKDSSNKTAVEKVEKCGLYGLAEKTLFHRVQVLEMSQKEDTCVLNSVLVRFVDEGRTGLV
PREQLWRLPEQFCTLPPQAVEFVVCRVKPADNEVEWNPKVTRYIHNKIVGKLHDAKVMLA
LGNTVWVDPMVHVTKLSNLKTSVIDYNVRAEILSMGMGVDNSGHVERLKKLYKEAKMPAF
EEHLTQTPTAPSPEDAASLHSQQGAGGAEGGADAETSAEDPKPETLSANTGDAPISKPPQ
PHVKSFHPQIKWFQKDDVVILKIQVRNVKDYRCKYFRDRVVFSAWVGDKFYRADLELQGS
IRKDSCRCVIRNDEPVITLAKERREPWRGLLRHRNPNVAFDFDHWEECEEDSHFSKAVTS
KRLPCKVAEVVGPSSSASEADGSESE
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggccgcccccggggcggcggcaggggccgcgcggctcgccacgcccgccacg
cccgccacgcccgccgccgggcgcgtcgtccagggcgagcgggccagaggcgcggcgaag
atgctcgaggtcctggtgctcaaggttgaagatccagattgcttctgggttattataaaa
ggatgtagtccctttttggatcatgaagtcgactatcaaaaactaaatagcgccatgaat
gacttctataacagcatgtgtaaagatatagaaataaaaccattaatgttggaagaagga
caggtctgcgtggtgtattgtccggagctacggtgctggtgcagggctgtcattaagtca
atcatgtcttcagcagaccattacctggcagagtgtttccttgtagacttcgccaggtac
attccagtaaaatctaaaaacatccgagttgcagtggaatcatttatgcagcttccctac
agagcaaaaaagttccggttgtactgcatgaagcctgttacattgcacattgacttctgt
gaagacagcgccgagattgtacctgccaagaagtgggacagtgccgctgttcagtacttt
cagaatgtcctgaaagcaactacccaggtagaagccaagttatgtgctgtggaagaagac
acttttgaggtttacctttatgtaaccataaaaaatgaaaaagtttgtgttaatgacgac
ctggttgcaaagaattttgcttgttatgtgtcacccatggagaagcagcagctggattct
gtagagaaaccaagattaaatatgaactcagcctcctccaagaaactcaacccagctctt
actctttggccaatgtttttgcaaggaaaatatttccaaagaatggaagattctcatggt
ttaaatttgctgacacattctctgcagcatacgaggtgcaaggatgttgttggtgacctg
gagccaactgctgcagtgctggataaagatgtgaattgtaatatggattcattgagagat
tcacctaaaaagaaatctgaaaagaaacagcagtgcctctctttaaaagatgaaaataag
tgtattgaatcttcagcatactggccaacaaaaagaggaataaccatatatgccgaccca
gatatcccagcaacaagtgcttcaagtcagaaaccaaatgagaaaccactttgcctggct
gagaagaaggattatgatgagaagaatggctgtgtgaaactactgcagttcttaaatccg
gaccctttgagagctgatggaatctctgatctacagcagttgcagaagttgaagtcggct
gtgcaaccgcctgttgcagtgctctggaacaggatcgagccctgcttgaccattgacacg
tcccctctttcagcagacctgaaaaagactcttcaaagaaacaagtaccctggacccagc
cacacggaatcctactcgtggcctcccatagcgcgtggctgcgatgtggtggtcatttct
cactgtggaaatgaccctttgctgtacctcccaccagttctcacaattttgcaaacgggg
ggctgctacaagtcgctgccaagtagaaacggacctcttgcagtcatcgtgtgccctggg
tggaaaaaggcccaattaacttttgaattattggaagactatagcaagtcctcgaggcct
cttcatcccatgttgttaacaatcggactccacaaagacgaagccaaaaatctgaagctg
cccagggggtgtgatgtgattgttacaaccccacagagcctgctgcggctgctcacggac
cagagcttgctgtttctcaggctctgccacctggtcctggatgaggtggaagtgctgttc
tcggaagctaacgagcagatgcttgctatattagataactttaaaaaaaatattgacgtt
gaagaaagagagtctgcacctcatcagatcgttgcagttggagttcactggaacaaacat
atagcgcatttaatcagagagttcctgaacgacccctgtgttgtgatcacggccatggaa
gaggctgccctctacggcaacgtccagcaggttgtgcacctttgcctggagagtggaaaa
acttctactttactccaagttcttgatttcattccaagccagacacagaagaccttgatc
ttcacctgctccgtggctgaagcagacatggtgtctaaggtagtagaaagcaattcaata
ttttgcttgaaaatgcacaaagaaatggtttttaacttaaaaagtgttttggaacagtgg
aaaaagaggttgagttctggctctcacattgtcctagccttgacggacgattgcatacca
ctcttggccatcactgatgccacatgtgtgattcacttcagcttcccctcctcgccaaaa
gtttttggtggacgcctgtattgcatgtctgatcattttcagaatttaaccgaacagggt
tctcctgcagaacagggagacaggaagaccaagtctgtcttgctgctgacggagagaaac
gcgagccatgccatgggcgtcctgcgctacttggagcgagcagatgccaaagtcccatcg
gagctgtacgagttcactgcaggggttctggaagccaaagaagataagaaggccacaagt
ccgctttgtccgtaccttaaggcttttggattttgcaaagaccaaaggatctgtcctgac
cgacaccacattaacccagaaatggacatgcccaggaaattatccaaccaagccctgccc
gtgtctggatacattaaagtaataccattttatgtttcaaatgcaacaaattactttggc
cgtataattgacaaatatttggatctttttgcaactcttaatgccgaaatgaatgaatat
tttaaggattccagtaataaaacagctgttgaaaaggtggagaaatgtggattgtatgga
ttagcagaaaaaacacttttccacagggttcaggtgttggagatgagccagaaagaagac
acttgtgtcctgaacagcgtcctggtgaggtttgtcgacgaaggcagaactggactcgtc
cccagagagcagctgtggcgcctcccggagcagttctgcacgctgccgccgcaggctgtg
gagttcgtggtttgtagagtgaagccagcagataacgaagtggagtggaatccgaaggtt
actaggtacattcataataaaattgttggaaagctgcatgatgcaaaagtgatgctggcc
ctgggaaatacagtttgggttgacccaatggtgcatgttacaaaactttcaaatttgaaa
acatctgtcattgattataatgttcgagctgaaattttgtcaatgggaatgggcgttgat
aattcaggacatgtggaacgactgaaaaaattatacaaagaagctaaaatgccagctttt
gaagaacatctaacccagaccccgaccgcgccttcgccagaggatgctgccagtctgcac
tcccagcagggggccggtggcgcagaaggcggcgcggacgcggagacaagcgcagaagac
ccaaagccagaaacgttgtctgcaaacactggagacgcccccatcagcaagcccccacag
ccacacgtgaaaagcttccatccacaaataaaatggttccagaaagacgatgttgtcatc
ttgaagatacaagtaaggaatgtcaaggattacagatgtaaatacttccgagacagggtc
gttttcagcgcctgggtgggagacaagttctacagagctgatttggagctgcagggcagc
atcagaaaagacagctgcaggtgcgtcatcagaaacgacgagcccgtgattactctggcg
aaagagagaagggagccgtggcgcggcctgctcagacacaggaatccgaatgtggctttt
gattttgaccactgggaagagtgtgaagaggacagccacttctccaaggctgtgacttct
aagaggctgccctgcaaagtggcagaggtggtcggacccagcagcagcgcttcggaggct
gacgggagtgagagtgagtga
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