KEGG   Oryctolagus cuniculus (rabbit): 127488867
Entry
127488867         CDS       T03373                                 
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-C
  KO
K08770  ubiquitin C
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03320  PPAR signaling pathway
ocu04120  Ubiquitin mediated proteolysis
ocu04137  Mitophagy - animal
ocu04140  Autophagy - animal
ocu05012  Parkinson disease
ocu05022  Pathways of neurodegeneration - multiple diseases
ocu05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127488867
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    127488867
   04137 Mitophagy - animal
    127488867
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    127488867
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    127488867
  09164 Neurodegenerative disease
   05012 Parkinson disease
    127488867
   05022 Pathways of neurodegeneration - multiple diseases
    127488867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocu04121]
    127488867
Ubiquitin system [BR:ocu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   127488867
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 127488867
NCBI-ProteinID: XP_051695506
LinkDB
Position
Unknown
AA seq 609 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPXDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIXAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLXGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGV
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccttaactggcaagaccatcaccctcgaggtggagcccagt
gacaccatcgagaatgtcaaggcgaagatccaggacaaggagggcatcccccccgaccag
cagaggctgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaggagtccaccctgcacctggtgctgcgcctcagaggtggcatgcagatcttc
gtgaagaccctgaccggcaagaccatcaccctcgaggtggagcccagtgacaccatcgag
aatgtcaaggcgaagatccaggacaaggagggcatccccnccgaccagcagaggctgatc
tttgccggcaagcagctggaagacggccgcaccttgtccgactacaacatccagaaggag
tccaccctgcacctggtgctgcgcctcagaggtggcatgcagatcttcgtgaagaccctg
accggcaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaaggcg
aagatccaggacaaggagggcatcccccccgaccagcagaggctgatctttgccggcaag
cagctggaagacggccgcaccttgtccgactacaacatccagaaggagtccaccctgcac
ctggtgctgcgcctcagaggtggcatgcagatcttcgtgaagaccctgaccggcaagacc
atcaccctcgaggtggagcccagtgacaccatcgagaatgtcaaggcgaagatccaggac
aaggagggcatcccccccgaccagcagaggctgatctttgccggcaagcagctggaagac
ggccgcaccctgtccgactacaacatccagaaggagtccaccctgcacctggtgctgcgc
ctcagaggtggcatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctcgag
gtggagcccagtgacaccatcgagaatgtcaaggcgaagatccaggacaaggagggcatc
ccccccgaccagcagaggctgatcnttgccggcaagcagctggaagatggccgcaccctg
tccgactacaacatccagaaggagtccaccctgcacctggtgctgcgcctcagaggtggc
atgcagatcttcgtgaagactctgaccggcaagaccatcaccctcgaggtggagcccagt
gacaccatcgagaatgtcaaggcgaagatccaggacaaggagggcatcccccccgaccag
cagaggctgatctttgccggcaagcagctggaagacggccgcaccctgtccgactacaac
atccagaaggagtccaccctgcacctggtgctgcgcctcagaggtggcatgcagatcttc
gtgaagaccctgnacggcaagaccatcaccctcgaggtggagcccagtgacaccatcgag
aatgtcaaggcgaagatccaggacaaggagggcatcccccccgaccagcagaggctgatc
tttgccggcaagcagctggaagacggccgcaccctgtccgactacaacatccagaaggag
tccaccctgcacctggtgctgcgcctcagaggtggcatgcagatcttcgtgaagaccctg
accggcaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaaggcg
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgccggcaag
cagctggaagatggccgcaccctgtccgactacaacatccagaaggagtccaccctgcac
ttggtcctgcgtctgaggggaggtgtctaa

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