Oceanirhabdus sp. W0125-5: OW730_00175
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Entry
OW730_00175 CDS
T08747
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element RNA-guided endonuclease TnpB
KO
K07496
putative transposase
Organism
ocw
Oceanirhabdus sp. W0125-5
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
OW730_00175 (tnpB)
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
RUBY_RBDX
DZR
HhH-GPD
Duc1
Zn_ribbon_8
C1_1
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-ProteinID:
WBW99826
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Position
complement(39945..41036)
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AA seq
363 aa
AA seq
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MNKAYKFRMYPNENQIKIIEKSFGCSRYVYNYFLNQRNEIYKAEKRCMKYTEQQNQLPSM
KKELVWLKEIDSTSLQMSLRNLDAAFKNFFEGRADRPKFKSKRDNYKTYTSNFVNNNIEI
KKDKIKLPKLKYVNAKIHRYVEGRVINATVSKTSSGKYFVSICVETKIEPLKKVSGNVGI
DLGLCHFAILSNGEKIENPKYLKKSLDKLAKEQRKLSSKEKGSNNWNKQRIKVARLHERI
SNQRLDFIHKLSKRIISDNQVIILEDLSVKNMMKNDKLAQSISDVSWYKFVTILDYKAKW
YGRKIHKINRWYPSSKTCNNCGHVLDEMPLNIREWKCPKCDSIHDRDINASRNILKQGLL
EIA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atcaacaaagcatataaattcagaatgtatccaaatgaaaatcaaataaagattattgaa
aaatcttttggttgttcaagatatgtatataattatttcttaaaccaaaggaatgaaata
tataaagctgaaaaaagatgtatgaaatatacagaacaacaaaatcaattaccaagtatg
aaaaaagaacttgtgtggcttaaagaaattgatagtacatcactgcagatgtcactaaga
aatcttgatgctgcattcaaaaatttctttgaaggtagagcagacagaccaaaattcaaa
agtaaaagagacaactataaaacatatacaagtaattttgtgaataacaatattgaaata
aaaaaagataaaataaaactgcctaaattgaaatatgttaatgcaaaaattcatagatat
gttgaaggtagagtaataaacgctactgtttctaaaacatcaagtggtaaatattttgta
tctatatgtgttgaaacaaagatagagccattaaaaaaagtatcggggaatgttggtata
gacttagggttatgtcattttgcaatattatcaaatggtgaaaagattgaaaatccgaag
tatctaaaaaagtcattagataaattggcaaaggaacaaagaaaattaagtagtaaagaa
aaaggcagtaacaattggaataagcaaagaataaaggttgctagactacatgaacgtata
tctaatcaaagattagacttcatccataagttatctaaaagaattataagcgataatcaa
gttataattcttgaagatttatcagttaaaaatatgatgaagaatgataaattagctcaa
agtatttcagatgtaagttggtataaatttgttactattctagactataaggcaaaatgg
tatggaagaaaaattcataaaataaatagatggtatccgtcatctaaaacatgcaataat
tgtggtcatgttttagatgaaatgccactgaatataagagaatggaaatgtcctaaatgc
gatagcattcatgatagggatataaatgccagtaggaatatcttgaagcaagggttatta
gaaatagcctaa
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