Oceanirhabdus sp. W0125-5: OW730_03610
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Entry
OW730_03610 CDS
T08747
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ocw
Oceanirhabdus sp. W0125-5
Pathway
ocw00220
Arginine biosynthesis
ocw00240
Pyrimidine metabolism
ocw00250
Alanine, aspartate and glutamate metabolism
ocw01100
Metabolic pathways
ocw01110
Biosynthesis of secondary metabolites
ocw01240
Biosynthesis of cofactors
Module
ocw_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
OW730_03610 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
OW730_03610 (carB)
00220 Arginine biosynthesis
OW730_03610 (carB)
Enzymes [BR:
ocw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
OW730_03610 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
GARS_A
ATPgrasp_Ter
ATP-grasp_4
RimK
MGS
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
WBW97878
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All DBs
Position
737759..740959
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AA seq
1066 aa
AA seq
DB search
MPLNKSIKRVLVVGSGPIIIGQAAEFDYSGTQACTALREEGVEVILANSNPATIMTDSEV
ADKVYIEPLTVEVLGKIIEKERPDSILPGMGGQCALNLVSELYNKGILEKYKVNIIGTEM
EGIIRGEDRDEFKKLLIKIGQPAIESTVVNTIEEGIEFANKVGYPLVVRPAYTMGGAGGG
IVDNEEELINIASVGLDLSRVGQVLLERSIKGWKEIEYEVVRDGAGNCITVCNMENLDPV
GVHTGDSIVVAPSQTISDKEYQMLRRASIDIINEVGIKGACNVQLALNPDSMEYAVIEIN
PRVSRSSALASKATGYPIAKVAAKIALGYTLDEIKNEVTGKTYACFEPALDYVVTKIPKW
PFDKFNTSNRRLGTKMMATGEIMSIGNSFESSFLKGIRSLEVNQYGMKHDKSARLSTEEL
KARVHTPDDERIFQLCELIRRGITLEELHEITQINMFFLSKLNNIIQEEKKLEETTIDAL
TKEWLLKLKKYGFSDKGIAGFIGCNPDEIYQKRKEFDIKPSYKMVDTCAGEFKAVSPYYY
STYDEYDEVEISEKRKIMVLGSGPIRIGQGIEFDYCSVHSVLALKEMGIETIIVNNNPET
VSTDFNVSDKLYFEPLTEEDVFNIIEKENPEGVIVQFGGQTGIKLTKFLKEKGVNVLGSA
PESIHAAEDRDEFEAILDKLNIERPKGIIAWNKIDAMKGIQELGFPALIRPSYVLGGHGM
KIANNNEEADVYLSDAFEKARNNSVLIDQYIRGREIEVDAICDGEEILIPGIMEHLERAG
VHSGDSITIYPSKNIAQEIKDVILDYTRRLALELNIIGMINIQYIEYKGKVYVIEANPRS
SRTVPYISKVTGIPIVSVGTQVMLGKKLKDLIYGTGVYKESKLTCVKVPVFSSQKLDDVE
ISLSPEMKSTGEVLGVGTTLEEALYKGFLAAGYSMKMKNNRILSTISNDKKDDFVDMLKD
INMPEIEYYATEGTNAKLNDCGFNVRQFDHMKLSEILRDRSVDFVVSTATKGNSSERNGF
KIRRAAAESYTDIFTSLDTAKAYLNVIKSGLTEEKINVYELDEYGI
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccgttaaataaatctattaagagagtacttgttgtaggatctggaccaataattata
ggacaagctgcagaatttgattattctggaacgcaggcctgtactgcattaagagaagaa
ggggtagaggttatcttagctaatagtaatcctgctacaatcatgacagatagtgaggtt
gcagataaggtttacattgaacctcttactgtagaagtattagggaagatcattgagaaa
gaaagaccagatagcatattacctggaatgggtggacagtgtgcattaaacttggttagt
gagctttataataaaggtatattagagaaatacaaagttaatataatcggaacggaaatg
gaaggtataatcagaggggaagatagagatgagtttaaaaagcttctgattaagattggc
caacctgcaatagaaagtacagtagttaatactattgaagaaggaattgaatttgctaac
aaagttggttacccattagttgttagaccagcatatacaatgggtggtgctggaggcggt
attgttgataacgaagaagagttaatcaatatcgcatcagtaggattagatttaagtaga
gtaggtcaagttcttcttgagagaagtataaaaggatggaaagagattgagtatgaagtt
gtaagagatggagcaggaaactgtataacagtatgtaatatggaaaacttagaccctgtt
ggagttcacactggagacagtatagttgtggcacctagccaaactataagcgataaggaa
tatcagatgttaagaagagcatcaattgacattattaacgaagttggtattaaaggggca
tgtaatgtgcaattagcattaaatccagatagcatggaatatgctgtaattgaaattaat
ccaagagtaagtcgttcatcagcacttgcctcaaaagctacaggatatccaatagctaaa
gtagcagctaaaattgctcttggatatactttagatgaaattaagaatgaggttacagga
aagacatatgcatgttttgaaccagctcttgattatgtagttacaaagataccaaaatgg
ccatttgataagttcaatactagtaatagaagacttggaactaagatgatggctacggga
gagataatgtctattggtaatagctttgagagttctttcttaaagggaataagatcatta
gaagtaaatcaatatggtatgaagcatgataagagtgcaagattatcaacagaggaatta
aaggctagagtacacactccagatgacgagagaatattccagctatgcgagttaattaga
cgaggaattacgttagaagaattacatgaaataacacaaataaatatgttcttcttaagt
aagttaaataatattattcaagaagaaaagaaattagaagaaactacaattgatgcgtta
actaaagagtggttattaaaattaaagaaatatgggttctctgataaaggaatagcaggt
tttattggatgtaatccagatgaaatataccagaagagaaaagagtttgatataaaacct
tcatataaaatggttgacacttgtgctggagagtttaaagctgtttcaccatactactac
tcaacatatgatgaatatgatgaagttgaaatctctgaaaagagaaaaataatggtgctt
ggttcaggaccaataagaattggtcagggaatagagtttgactattgttcagtacattca
gtattagctcttaaggaaatgggaatagagactataatagttaacaacaacccagaaaca
gtaagtacagattttaatgtatctgataagttatactttgagcctttaactgaggaagat
gtatttaatataattgaaaaagaaaatcctgagggcgtaattgttcaatttggtgggcaa
acaggaataaaacttactaaatttttaaaagaaaaaggtgtaaatgtattagggtcagca
cctgagagcattcatgctgctgaggatagagatgaatttgaagctatcctagataaactt
aatattgaaagaccaaaaggaataattgcttggaataaaatcgatgctatgaaaggaatt
caagaattaggattcccagcattaattagaccttcttatgttttaggtggtcacggaatg
aaaattgcaaacaataatgaagaagctgatgtatacctttcagatgcctttgagaaagct
cgtaataacagtgttttaattgaccaatatataaggggaagagaaattgaagttgatgct
atatgtgatggggaagagatattaattcctggaatcatggagcatcttgagagagcggga
gttcactccggggatagtataactatatacccttcaaagaatattgctcaagaaattaaa
gatgtaattcttgattacacaagaagattagctttagagttaaatataattggtatgatt
aatattcagtacattgagtacaaaggtaaagtatatgtgattgaagctaatccaagatca
agtagaacagtaccttatataagtaaagtaactggaattcctatagtaagtgttggtaca
caagtaatgctaggaaagaaattaaaagatctgatctatggtacaggggtatataaagaa
agcaagttaacatgtgtaaaagtacctgtattctcgagtcagaaacttgatgatgttgag
ataagcttaagtccagagatgaaatccacaggagaggttctaggtgtaggaacaacattg
gaagaggcactgtacaaaggattcttagctgcaggatatagcatgaagatgaagaataac
agaattttatccacaattagtaatgataagaaggatgactttgtggatatgttaaaagat
attaacatgccagaaatagagtactatgctacagaaggaacaaatgcaaaattaaatgat
tgtggttttaatgtaagacagtttgatcatatgaaattaagtgaaatattaagagataga
agtgtagactttgttgtaagtacagctactaaaggaaattcttctgaaagaaatggattt
aaaataagaagagcagctgctgaaagctatactgatatattcacatcattagatacagct
aaagcatatcttaatgttataaagagtggtcttactgaagaaaaaataaatgtatatgaa
ttagatgagtatggaatttaa
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