Oceanirhabdus sp. W0125-5: OW730_04080
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Entry
OW730_04080 CDS
T08747
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ocw
Oceanirhabdus sp. W0125-5
Pathway
ocw00470
D-Amino acid metabolism
ocw00550
Peptidoglycan biosynthesis
ocw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OW730_04080 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OW730_04080 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ocw01011
]
OW730_04080 (murD)
Enzymes [BR:
ocw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
OW730_04080 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ocw01011
]
Precursor biosynthesis
Amino acid ligase
OW730_04080 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Pyr_redox
MurD-like_N
LemA
MurD_N
DUF6012
Motif
Other DBs
NCBI-ProteinID:
WBW97955
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All DBs
Position
835384..836769
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AA seq
461 aa
AA seq
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MAMNFKEFKENIKGKKVAVVGIGVSNIPLIKKLAEYGSKITAFDKKNHDDISVELLEEFN
KLGINLCLGENYLEGLTGFDIVYRTPSMMPDNRYLVRCREEGAIITSEMEEFVKYCPAKI
FAVTGSDGKTTTTSIIYEILKEEGYETWVGGNIGTPLFDKLDEMEKEHKVVLELSSFQLI
SMTQAIDVAVVTNLSPNHLDIHKDMDEYIDAKKNIFLYQTREDLLVINRENEITNAFEKE
SKGLVTKFSLNREIKNGAFYKDGKLYLGDQFVCNKEDIRLIGMHNVDNMLAAFCATKDDV
SIESMNKVASSFSGVEHRIEFVREVDGVKYYNDSIASSPTRTIAGLRGFNRPVILIAGGY
DKNIPFDTLAKEGFQYVKKLILVGLTKDKIRAEFEKEMSSRGKSIPIYEAKTFEETVEIA
ERISEYGDIVYLSPACASFDMFPNFMLRGEKFKELVNDMNR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctatgaattttaaagaatttaaagaaaacattaaaggtaaaaaagttgcagttgta
ggtataggggtaagtaatatacctttaattaaaaaacttgcagaatacgggagcaagata
actgcatttgataaaaagaaccatgatgatatttcggttgaattattagaagagtttaat
aagcttgggattaatctatgcttgggagaaaactatttggaaggattaacgggatttgat
attgtttatagaacaccttcaatgatgccagataatcgttatttagttagatgtagagaa
gaaggagcaataataacttcagaaatggaggagttcgtaaaatactgtcctgctaagata
tttgctgtaacaggaagtgatggaaaaacaacaactacttcaataatatatgaaatttta
aaagaagaaggctatgaaacttgggttgggggaaatataggaacacctttatttgataag
cttgatgaaatggaaaaagaacataaggttgttttggaattatcaagttttcaattaata
agcatgacgcaagctatagatgtggctgtagtaacaaatcttagtccaaatcatttagac
atacacaaggatatggatgaatatattgatgcgaaaaaaaatatattcttatatcaaaca
agggaagacctgttggttattaacagggaaaatgaaataactaatgcatttgaaaaagaa
tctaaggggttagtaacaaagttctctttgaacagagaaattaagaatggtgctttttat
aaagatggtaagttatatttaggtgatcaatttgtttgtaataaagaagatatcaggttg
ataggaatgcataatgttgataatatgcttgctgctttctgtgcaactaaagatgatgta
tccatagaaagtatgaacaaagttgctagttcattttcaggagttgagcatagaattgaa
tttgttcgagaggttgatggagttaaatactataatgattcaatagcttcaagtccaact
agaacaatagctggtttaagaggttttaatagacctgttatattgatagctggaggatat
gataaaaatatcccttttgatactttagcaaaagaaggattccaatatgtgaaaaaactt
atattagtagggttgacaaaggataagataagagcagaatttgaaaaagaaatgagttca
aggggtaagagcattcctatatatgaagctaagacttttgaagaaacagtagaaatagca
gaaagaatttcagaatacggagatatagtttatttatcaccagcatgtgctagttttgat
atgtttccaaatttcatgttaagaggggaaaagttcaaggaattagttaatgatatgaat
agataa
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