Oceanirhabdus sp. W0125-5: OW730_04175
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Entry
OW730_04175 CDS
T08747
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ocw
Oceanirhabdus sp. W0125-5
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocw03400
]
OW730_04175 (radA)
DNA repair and recombination proteins [BR:
ocw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OW730_04175 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_14
AAA
AAA_16
ABC_tran
AAA_22
GvpD_P-loop
nSTAND3
SLFN-g3_helicase
ATPase_2
Rad51
AAA_24
RecA
NTPase_1
HypA
Elong_Iki1
NAGPA
ABC_ATPase
NACHT
DUF7129
DUF7125
ATP-synt_ab
AAA_29
DZR
AAA_11
Fer4_20
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WBW97967
LinkDB
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Position
856102..857463
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AA seq
453 aa
AA seq
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MAKIKSSFVCQECGYETPKWMGKCPDCGNWNSFIEEVKTKDIKHARAVTTTGSSKPEKIT
NIKSGEKERLDTNINELNRVLGGGLVKGSLTLISGDPGIGKSTLLLQTASNIADKYGKVL
YVSGEESEQQIKMRGDRLKANQENLYVVSETNIDTIEVHITNVEPSFVIIDSIQTLYKSN
ISSAPGSVSQVRECSNDLMRLAKGKQIPFFIVAHVTKQGELAGPRVLEHMVDTVLHFEGE
RTQEFRILRTIKNRFGTTSEIGVFEMRGEGLIEVENPSKVFLQDSEYAHEGSVVVGIVEG
TRPVLVEMQSLVSQSNVPMPRRTAVGVDKSRLNLVLAVLEKKFRVPFYDRDVYVNVVGGL
NLDGTYGDLGLAISMISSHKNKPVKLEKAIIVGEIGLTGEVRPVTHCEKIVNEAKKLGFE
NIIIPKKNLDKIKINDINIIGISNLRECLTKVF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattaaaagtagtttcgtttgtcaagaatgtggatatgaaactcctaaatgg
atggggaaatgtcctgattgcggtaattggaatagttttattgaagaagttaaaactaaa
gatataaaacatgcaagagcagttactacaacaggcagcagtaagccagagaaaataaca
aatattaaatcaggtgaaaaagaacgcctagatacaaatataaatgaattaaatagagta
cttggtggcggattagttaaaggctccttgactctcatttcaggtgatccaggaatagga
aaatccacattgctgcttcaaacagctagtaacatagcagataaatatggaaaggttctt
tatgtttcaggagaagaatcggagcaacaaattaaaatgaggggagatagattaaaagct
aatcaagagaatctgtatgttgtttcagagactaatatagatacaattgaagtacatatt
actaatgttgaaccaagttttgttataatagattcaattcaaacattgtacaagagcaat
atatcttcggcaccgggaagtgtttcgcaagttagagaatgttctaatgacttgatgaga
ttagctaagggaaagcaaataccattctttattgtggctcatgtaactaaacaaggtgaa
ttagcagggcctagagtactggaacatatggttgatacagtgcttcattttgagggagag
agaacacaagaatttcgaattttgagaactataaagaatagatttggaacaacaagtgaa
attggagtttttgaaatgcgtggtgaaggacttattgaagttgaaaatccttcaaaggta
tttttgcaagactcagaatatgctcatgaggggtctgtggtagttggaatagttgaagga
acaaggcccgttcttgtagaaatgcaatctcttgttagtcaaagtaatgttcctatgcca
agaagaactgctgtcggggttgataaatctagacttaatcttgttttggcagttttagaa
aagaaattcagggtaccattttatgatagagatgtatatgtaaatgtagttggcggattg
aacctagatggtacatatggagatttaggtttggcgatttctatgatttcaagccataaa
aataaacctgtaaagcttgaaaaagctataatagtaggggaaattggattaactggagag
gtaagaccagtgacacattgtgagaaaattgtaaatgaagctaaaaaattaggatttgaa
aacataataattccaaagaaaaatttggataagattaaaattaatgatataaatataata
ggcatttcaaatttgagggaatgtttgactaaagtattttaa
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