Oceanirhabdus sp. W0125-5: OW730_04465
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Entry
OW730_04465 CDS
T08747
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ocw
Oceanirhabdus sp. W0125-5
Pathway
ocw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OW730_04465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocw03021
]
OW730_04465
03400 DNA repair and recombination proteins [BR:
ocw03400
]
OW730_04465
Enzymes [BR:
ocw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OW730_04465
Transcription machinery [BR:
ocw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OW730_04465
DNA repair and recombination proteins [BR:
ocw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OW730_04465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WBW98021
LinkDB
All DBs
Position
899848..900801
Genome browser
AA seq
317 aa
AA seq
DB search
MLEIEKPKLECVECSEDGSYGKFVIEPLERGYGITLGNALRRILLSSLPGAAANWIKIDG
VLHEFSTVKGVKEDVTQIILNLKQLAVRFLELETTQSTLIIDAEGPGVVTARDIRTNGDV
EIMNEDLHIATLDSDGKLSMEINVVRGRGYVSQNKNKNEELPIATIPVDSIFTPVKRVNF
TVDNTRVGQITDYDKLTLELWTDGTIKPEEAIGLSAKILIEHFKLFMTLTDQADNVEIMV
EKEEDKKEKVLEMSIEELDLSVRSYNCLKRAGINTVQELTEKSMDDMMKVRNLGKKSLEE
VQKKLIELNLGLRQSEE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaatagaaaaaccaaaattagagtgtgttgaatgttcagaagatggttcatat
ggtaaatttgtcattgagccacttgaaagaggatatggtataacattaggtaatgcttta
agaagaattcttctttcatcattacctggtgctgcggctaattggattaaaattgatgga
gttctacatgaattttcaacagttaaaggggttaaagaggatgttacacagatcatccta
aaccttaagcaattagctgtaagatttttagaattagaaacaactcaaagtacattaatt
atcgatgcagaaggacctggtgttgttactgctcgtgatatcagaactaatggtgatgta
gaaattatgaatgaagatcttcatattgctacactagattctgatggaaagttatctatg
gaaattaatgtggttagaggtagaggatatgtttctcagaacaagaataaaaatgaggaa
cttccaatagctacaatacctgttgattctatatttacacctgtaaaaagagttaacttt
actgtagataatactagagttggtcaaattactgattatgataagcttactttagaactt
tggactgatggtacaattaagccagaggaagctattggtttatcagctaaaattcttatt
gaacattttaaattattcatgacattaactgatcaagcagataatgttgaaatcatggtt
gagaaagaagaagacaaaaaagagaaagtcctagagatgagtattgaagagcttgatctt
tctgttagaagttataattgcttgaagagagctggaattaacactgttcaagagcttact
gaaaaatcaatggatgacatgatgaaagtaagaaatcttggtaaaaaatctcttgaagaa
gttcaaaagaaattaatagagttaaatttaggcttaagacaaagcgaggaataa
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