KEGG   Oceanirhabdus sp. W0125-5: OW730_04490
Entry
OW730_04490       CDS       T08747                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
ocw  Oceanirhabdus sp. W0125-5
Brite
KEGG Orthology (KO) [BR:ocw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ocw03016]
    OW730_04490 (truA)
Enzymes [BR:ocw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     OW730_04490 (truA)
Transfer RNA biogenesis [BR:ocw03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    OW730_04490 (truA)
 Prokaryotic type
    OW730_04490 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: WBW98026
LinkDB
Position
903744..904487
AA seq 247 aa
MDNFKNIKLEVQYNGAKYYGWQKQKTHITVQEVLEKTLSKLLKEEIEVTGCSRTDSKVHA
LKYVCNFKSKTNIPCEKIKYALNPILPDDIVVLNSIEVDNMFHSRYSCIGKTYLYKILNR
EVRGVFGREGIYHYKDHLCLEKMKLASKYFIGTHDFNAFKSTGSSVKSTIRTIESISIIK
NDQEIIIEVTGDGFLYNMVRIIVGTLIQVGINKIEPEYIQTILKSKDRKLAGPTAPAEGL
YLKEIYF
NT seq 744 nt   +upstreamnt  +downstreamnt
gtggataattttaaaaatattaaacttgaagttcaatataatggagctaaatattatgga
tggcagaaacaaaagactcacattactgtccaagaggtattagaaaagacattaagtaaa
ttacttaaagaagaaattgaggttacaggatgtagtagaacagattctaaagtacatgca
cttaaatatgtgtgtaactttaaaagtaaaactaatataccttgtgagaaaataaaatat
gctttaaatccaatattaccagatgatattgtggttctaaactcaattgaagtagataat
atgtttcactcaagatattcttgtataggaaagacctatttatacaagatattaaatagg
gaagtaaggggtgtctttgggagagaagggatatatcattataaagaccatctatgtctt
gagaagatgaagttagcatctaaatactttattgggacccatgactttaatgcgtttaaa
agcacaggtagctctgttaaatcaactatcagaactattgaatctataagtattattaaa
aatgatcaggagattataatagaagttactggagatggttttctatataatatggtaagg
ataattgtaggtacactaatacaggttgggataaataaaatagagcccgaatatattcaa
acaattttgaaaagtaaagatagaaagctagcaggaccaacggctccagcggaaggtttg
tatttaaaagagatatatttttaa

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