Oceanirhabdus sp. W0125-5: OW730_05240
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Entry
OW730_05240 CDS
T08747
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ocw
Oceanirhabdus sp. W0125-5
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocw03400
]
OW730_05240
DNA repair and recombination proteins [BR:
ocw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OW730_05240
Archaeal homologous recombinant proteins
OW730_05240
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Paralog
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Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WBW98172
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Position
1069427..1070596
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AA seq
389 aa
AA seq
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MKIVHTGDWHIGKLVHGIHMTEEQRYVLDKFIEFLKEENPDVLIIAGDVYDRSIPPVEAV
ELLDEFLSKVLIDLGIKVMAIAGNHDSPDRLAFGSKILEKKGLYICGELKEKLEPIVFED
EYGKVNFYLIPYLEPAIIREKLKNNDIKTHDDAYKEVLNKIKANINENENERNVLVTHAY
LGGGVEIETSESERPLSIGGSDIVSVEYFKDFDYVALGHIHKPQKVKYNHVRYAGSLMKY
SFSEYNQKKSFTIVNLGADGCDIQLEPIEVKRDMRKIKGELEQLISKDVYKDGNNEDYIM
AILTDKGEVVDAIGKLRAVYPNVLRIERESLERINEGERTSAGEDFVKKNPYELFKEFYE
NIVGQDLDEIEENILKETIGSIVREGREQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagtacacacaggagattggcatataggaaagttagttcatggtattcatatg
acagaggaacaaagatatgttttggataaatttattgagtttttaaaggaagaaaatcca
gatgtattaattattgctggagatgtttatgatagatctattcctccagttgaagcggta
gaattattagatgaatttttgagtaaagtattaattgatttaggcataaaggttatggct
attgcagggaaccatgatagtccagatagattggcatttgggagcaagatattagagaag
aagggtttatatatatgtggagagttaaaggagaagcttgagccaatagtatttgaagat
gaatatgggaaagtgaatttttatttaattccatatcttgagcctgctattattagagaa
aaattaaagaataatgatataaagactcatgatgatgcttataaagaagtgttaaataag
ataaaagcaaatattaatgaaaatgaaaatgaaagaaatgtattagttacccatgcttac
ctaggtggtggggttgaaattgaaactagtgaatctgagagacctttatccattggtgga
agtgatattgtatcagtagagtattttaaggattttgattatgttgcacttggtcatata
cataaaccacagaaggtaaaatataatcatgttagatatgcagggtctctaatgaaatat
tcattttcggaatataatcagaagaagagcttcaccattgttaatttaggagctgatgga
tgtgatattcaattagaacctatagaagtgaagagggatatgagaaagattaaaggggaa
ttagagcaattgatttcaaaggatgtatataaggatggaaataatgaagattatataatg
gcaatccttacagataaaggagaagttgttgatgctataggaaaacttagggcggtatat
cctaatgttcttagaatagagagagagtcactagagagaattaatgaaggggagaggaca
tctgctggagaggattttgtaaagaagaatccttatgagttattcaaagagttttatgag
aatattgttggtcaggaccttgatgagatagaagagaatattttgaaagaaacaattggt
agtattgtaagagaagggagggagcagtag
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