Oceanirhabdus sp. W0125-5: OW730_07015
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Entry
OW730_07015 CDS
T08747
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ocw
Oceanirhabdus sp. W0125-5
Pathway
ocw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OW730_07015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocw03400
]
OW730_07015
Enzymes [BR:
ocw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OW730_07015
DNA repair and recombination proteins [BR:
ocw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OW730_07015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
Helicase_RecD
HHH
PIF1
AAA_22
DEAD
SLFN-g3_helicase
DUF4314
nSTAND3
HHH_2
AAA_28
UvrD-helicase
UvrD_C
HerA_C
AAA
NTPase_1
AAA_29
AAA_23
Grp7_allergen
TraI_hel_assoc_N
Lipoprotein_18
SRP54
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WBW98506
LinkDB
All DBs
Position
1447199..1449412
Genome browser
AA seq
737 aa
AA seq
DB search
MEEIIGMVEAIIYENESNGYVVAKIKIENRLETINGSMPFLKEGMQIKAAGVWTEHKKFG
KQFKVEKWEEVKPKSQEGVERYLASGIINGIGPVTAHRIIKKFGDKALDIIENDIDKLLE
VEGIGKKKIDIIKKSFEQSKDIKDLVVMLQGYGISPKQCIRIHKVYGKDAVSNIKKNPYK
LIDDIRGIGFKTADRIALSMGIDKTSPFRISSGIKYVIDQFCLNGNTYMPKSMLLQQSRE
ILGVQTDVVEDGLYNAVLEQKVKNEVIEGEECVYNIPYYYCELGITKKIVHMIAGTYPKF
DVDLIKKIEEFEKETGISFAESQKEAIIGAFENGVEIITGGPGTGKTTIINCITNIMEDL
GLEVFMAAPTGRAAKRMSESTGRESKTIHRLLELGYGEDEEELAFARNEKSPLECDVLIV
DEASMIDLTLMNNLLKAVKYGMRLIIVGDVDQLPSVGAGRVLHDLIDSDCIHVVRLRDIF
RQSEKSMIVLNAHKINNGEMPELNNKDKDFFFLKKNPRTEALDTIISLVSERLPKFNPKW
NSIRDIQILSPMRKGVLGVDNLNEQLQEILNPREKDKKEIDVRMGKFRVGDKVMQIKNNY
SIKWTKFDGTNNKSGLGVYNGDVGYISFIDESGNVHVKFDDGKLVVYEDMFIDELTLAYA
VTIHKSQGSEFPVVVIPMFMGPPMLMNKNLLYTGITRAKGMVVLVGEEKAMKYMISNDKT
YERFSALSYRIKSIFDI
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaataatcggaatggtagaagctataatatatgaaaatgaaagtaatggatat
gtggtagctaaaattaaaattgaaaatcggttagaaactataaatggatcaatgcctttt
ttgaaagaaggtatgcagataaaagctgctggggtgtggactgaacataaaaaatttggt
aaacagtttaaggttgaaaaatgggaagaagtaaaacctaaatctcaggagggggtagag
agatatcttgcctctgggattatcaatggaattggtcctgttacagcacacagaattatt
aagaagtttggcgataaagctttagatataattgaaaatgatattgataaattattagaa
gtagaaggtatagggaagaaaaaaattgacataattaaaaaatcatttgaacagagtaaa
gatattaaagatttggtggttatgcttcagggatatggaatatcacctaaacaatgtatt
cgtatacataaggtatatggaaaagatgctgtaagtaatataaaaaagaatccttataaa
cttattgatgatattaggggaataggatttaaaaccgcagataggattgctttaagtatg
gggattgataaaacttcaccatttagaatatcttcaggtattaagtatgtaatagatcaa
ttttgtttaaatggaaatacgtatatgccgaaaagcatgcttctgcagcagagtagagaa
atactaggggtgcagactgatgtggtggaagatggattatataatgctgttctagagcag
aaagtaaagaatgaggttattgaaggggaagaatgtgtttacaatattccatattattat
tgtgaattaggaattacaaaaaaaatagttcatatgattgcaggaacatatcctaagttt
gatgtagatttaattaaaaagatagaagaatttgagaaggaaactggaataagttttgct
gagtctcagaaggaagctattattggagcttttgagaatggagtagaaataattacaggt
ggtccaggtacaggtaaaacaacaataatcaattgtataactaatataatggaagacctt
gggttggaagtttttatggcagcgcctacaggtagagcggctaagagaatgagcgaatca
actggaagagaatcaaaaactatacataggttattagagttaggatatggagaagatgaa
gaagaacttgcttttgctagaaatgagaaatcaccattggaatgtgatgtgttaattgtg
gatgaagcctcgatgatagatttaactctcatgaataatttattaaaggctgttaaatat
ggtatgagacttataattgtaggagatgttgatcaattaccatctgttggtgctggaaga
gttttgcatgatttaattgatagtgattgtattcatgtggttaggttaagggacatattc
agacaatctgagaaaagtatgatcgtattaaatgctcataagattaataatggagaaatg
cctgaattaaataataaagataaagattttttctttttaaagaagaatcctagaacagaa
gccttagatacaataataagtttagtcagtgagcgtttacctaaatttaatcctaagtgg
aatagtattagagatattcagatattatcgcccatgaggaagggtgttcttggtgtagat
aatcttaatgagcaactacaagaaatattaaatccaagagaaaaagataaaaaagagatt
gatgtaagaatggggaaatttagagtaggcgataaggtaatgcaaattaaaaataactat
tctataaaatggactaaatttgatggaacaaataataaaagcggacttggagtatacaat
ggagatgttgggtatattagttttattgatgaaagcggtaatgttcatgtgaagtttgat
gatggtaagcttgttgtgtatgaagatatgtttatagatgaattaacccttgcatatgct
gttacgatacataaaagtcaaggaagtgaatttccagttgtagttataccaatgtttatg
ggacctcctatgttaatgaacaaaaatttgttatacactggaatcacaagggcaaaagga
atggttgttcttgtaggagaagagaaagctatgaaatatatgataagtaacgataaaacg
tatgaaaggttttcagcgttaagttatagaattaaaagtatatttgatatataa
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