Oceanirhabdus sp. W0125-5: OW730_11275
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Entry
OW730_11275 CDS
T08747
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
ocw
Oceanirhabdus sp. W0125-5
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocw03019
]
OW730_11275 (rapZ)
Messenger RNA biogenesis [BR:
ocw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OW730_11275 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
DUF3674
Motif
Other DBs
NCBI-ProteinID:
WBW99300
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All DBs
Position
2430809..2431693
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AA seq
294 aa
AA seq
DB search
MKFVVVTGLSGAGKSQAMRCFEDLGYFCVDNLPPTLMCKFADACYKSQGKINKIALVIDI
RGGDFFHKTFESLAELKKEGYKYDILYLEADDKTLIKRYKETRRKHPLSPEGRVVDGITE
EREHLKELRENANYIINTSKLSIWQLRDKISELFGEEGQVEREISVTALSFGFKYGIPVD
SDLVFDVRFLPNPYYIPDLKGFSGEEKPVKDYVFSFDETVDFVEKLTDMLDFLIPKYKKE
GKRQLIISIGCTGGRHRSVAISNKVYEILNHKGYKVNVQHRDIVEDVNRGVSKL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgttgtagtaacagggctttcaggagcaggtaaatcacaggctatgagatgt
tttgaagatttaggatatttttgtgttgacaatttaccaccaacgttaatgtgtaaattt
gctgacgcttgttataaatcacaaggtaaaataaataagattgctttagtgatagatata
agaggaggagatttcttccataagactttcgagagtcttgctgagttaaagaaagaagga
tataaatatgatatcctgtatttagaagctgacgataagacacttattaaaagatataag
gaaacacgtagaaaacatcctctttcacctgagggaagagtagtggacggaataactgaa
gaaagagaacaccttaaagaacttagagagaatgctaactatattataaatacatcaaag
ttatcaatttggcaattaagagataagatttcagagttatttggtgaagaaggtcaagtg
gagagggagatatctgttacagcactttcatttggatttaaatacggtattccagtagat
tcagaccttgtatttgacgttagatttttaccaaatccatattacattccagatcttaaa
ggattctcaggggaagagaaacctgttaaagattatgttttttcttttgatgaaactgtg
gattttgttgagaagttaacagatatgttagacttcttgatcccaaaatataaaaaagaa
ggtaagagacaacttattatatctataggatgtacaggtggaagacatagatcagttgca
atatctaataaagtttatgaaattttaaatcataaaggatataaagttaatgttcagcat
agagatatagttgaagatgttaatagaggagtatccaaattatga
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