Oceanirhabdus sp. W0125-5: OW730_11920
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Entry
OW730_11920 CDS
T08747
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
ocw
Oceanirhabdus sp. W0125-5
Pathway
ocw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OW730_11920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocw03400
]
OW730_11920
DNA repair and recombination proteins [BR:
ocw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
OW730_11920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WBW99415
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Position
2573427..2575796
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AA seq
789 aa
AA seq
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MHERSLRILEFDKIKDKVKKYTKSSVGKELLDNLKPYNTVKDIQDRLTETNEAFNIIMKK
SNPPFEGLYDVREGVSRAGKGASLQAGQLLKIAQAMSCARRFKTYVKSDDETISYKKLQD
LCAGITPLKFIEDRIFTAIISEDEVSDKASEKLFSIRRTLKNKNNDVKDKVGSLVRTYSS
YLQENLYTIRGDRYVIPVKAEHKGSVKGLVHDVSASGATLFIEPISLVNLNNEIKELMIK
ERAEIEKILAELSALIYENHSVIKINCDIIWELDFIFAKAKYALELNCSMPIINDDGIID
IIQGRHPLINQDEVVANDIYVGKHYNSLVITGPNTGGKTVTLKTLGLIQIMALSGLMIPA
RDGSTVSFFEDIYADIGDEQSIEQSLSTFSSHMTNIVHIMENANEKSLVLFDELGAGTDP
TEGAALAISILEDLRKRGCKIAATTHYSELKGYALKTEGVENGSVEFDVNTLRPTYRLLI
GVPGKSNAFEISRRLGLSDYIIENAKSNISEINLEFESLIESLQSKKIQAEKNERESLRI
KMEAQKIKERYQEKSAKLENVRDKAIIEAQREAKMILKQAKEEADEILKNIRKMEAMGYT
SEARQQLEKERLKLRDKIASKDRAISSTEQDKGNKLKTVHEGQIVLLTTLNQKVTVLTKP
NSKGEVTVQAGIMKVNVKVDQLRACGQGDTASEYKNKKRSKEMKLKMRSVSSSVDLRGMD
SQEALMTVDKYLDDAYMGGLGEVTIIHGLGTGVLKKVVTDMLKRHKHVKEYRPGVYGEGG
AGVTIAILK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaagatcattaagaatattagaatttgataaaattaaagataaagtaaaaaaa
tatacgaagtcttctgttggtaaagaacttttagataacttaaaaccttataatactgtt
aaggacattcaagacagattaacagaaactaatgaggcttttaatataattatgaaaaag
agtaacccgccttttgaaggattgtatgatgttagagaaggtgtcagcagagcaggaaaa
ggtgcttctcttcaagctggtcaattattaaaaattgctcaagcaatgagttgtgctaga
agatttaagacatatgtaaaaagtgatgatgaaacaatatcgtataaaaagttgcaagac
ttatgtgctggaataacacctttaaagtttatagaagatagaattttcactgcaataatc
agtgaagatgaggttagtgataaggcaagtgaaaagttattctcaattagacgaactctg
aaaaataagaataatgatgttaaagacaaagtagggtcacttgtaagaacatactcaagt
tatcttcaggagaatctatatactataagaggagataggtacgttatccccgtaaaggca
gagcataaaggatctgtaaaagggcttgttcatgatgttagtgcttcaggagcaacttta
tttatagagcctatatcacttgtaaatttaaacaatgaaataaaagaacttatgataaaa
gaaagagctgagattgaaaaaatattagctgaattatcagcgcttatatatgaaaatcat
tctgtaataaaaattaactgtgatataatttgggaacttgattttatatttgcaaaagct
aaatatgctttagaattaaactgttcaatgccaataattaatgatgatggaattattgat
ataatacaaggaagacatccgcttattaatcaggatgaagttgtggcaaatgatatttat
gttgggaagcattataactcccttgttattacaggtccaaatacaggaggtaaaacagtt
accttaaagacacttggattaattcaaataatggcattaagtggattgatgataccagca
agagatggttcaacagtaagcttctttgaggacatatatgcagatattggggatgaacaa
agtatagaacaaagtttatcaacattctcttctcacatgactaatatagttcacataatg
gaaaatgctaatgaaaaatctttagtactttttgatgaacttggagcaggaacagatcca
actgaaggagccgctcttgcaatatcgattcttgaagatcttagaaaaagaggatgtaaa
attgcagctacaactcattacagtgaacttaaaggatatgcgcttaaaacagaaggcgtt
gagaatggttcagttgaatttgatgtaaatacattaagaccaacatatagattattaatt
ggcgttcctggtaaatcaaatgcctttgaaatatcaagaagactaggattaagtgattat
attattgagaatgcaaaaagcaatatttcagaaatcaatcttgaatttgaaagcttgata
gagagtttacaaagtaaaaaaatacaagcagagaagaatgagagagagagtttaagaata
aagatggaagctcagaagattaaggagcgatatcaagaaaaatctgctaaactggagaat
gttagagataaagcaattattgaagctcaaagagaagcgaagatgatacttaaacaagct
aaagaagaggctgatgagattttaaagaacatcagaaaaatggaagctatgggatatact
tcagaggcaagacaacagcttgaaaaagaaagattaaagctgagagataagattgcttca
aaagatagagcaatttcatcaactgaacaagataaaggtaacaaattaaaaactgttcat
gaaggacagattgttcttcttacaacattaaatcaaaaagtaacagtccttactaagcca
aactcaaaaggtgaagtgacggttcaagctggcataatgaaagttaatgttaaggttgat
caactaagagcatgtggtcaaggcgatacagcttcagaatataaaaataagaagagaagc
aaagaaatgaaacttaagatgagaagcgtaagttcatctgttgatttaagaggaatggac
tcacaagaagcccttatgacagtagataaatatcttgatgatgcttatatgggtggtcta
ggagaagttacaataatacacggattaggtacaggagtacttaaaaaggttgttacagat
atgcttaaaagacataaacacgttaaggaatatagacctggggtttatggtgaaggtgga
gcaggagtaacaatcgcaatccttaaataa
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