Oceanirhabdus sp. W0125-5: OW730_12410
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Entry
OW730_12410 CDS
T08747
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ocw
Oceanirhabdus sp. W0125-5
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocw03000
]
OW730_12410
Transcription factors [BR:
ocw03000
]
Prokaryotic type
Helix-turn-helix
Other families
OW730_12410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS
AAA_5
PAS_9
GAF
AAA_2
PAS_4
Mg_chelatase
AAA
PAS_8
HTH_50
HTH_30
AAA_7
MCM
ATPase
T2SSE
AAA_22
Diacid_rec
AAA_16
HTH_7
Motif
Other DBs
NCBI-ProteinID:
WBW99509
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Position
2699448..2701355
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AA seq
635 aa
AA seq
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MKSTEPKPHKQYIVQSHERCSSQGIDKGLVYSRKILSGKKLSEKLEEKKELIVIATPFMN
SLYNCVKGSNFFAIITDEEGCILNVMGDKGIVDEAYKLKMVPGAYMNEENIGTNAMSLAL
TQKVPVQVSNNEHYLESYHKWTCSCCPIKDTKGNIIGTIDLTGYSENVHPHTLGMVVAAA
KFIEKMLEINKYNEALIHNNNHIKTIFNTISKGIITLDLSGTIKTTNKIANEMFGFSQTK
ILEMKIWDLVEGWQEILDTLYSEKNFIDEDVYIKSKKNKLQLNVSAHPILDSEKRIQEII
LVFQELKKVRKLAGRISSGHAVYTFNKIIGENQEFLKVINYCNKIANSRSTILITGESGT
GKEVFAQSIHNASDRRDEPFIAVNCGAIPRSLIESELFGYEDGAFTGAKRGGCPGKFEIA
DGGTIFLDEIGEMSLDMQTKLLRVIEEKVINRIGGRNPIPVNVRIIAATNKNLKAEVEKG
NFRNDLFYRLNVLPVYLPPLRDRKDDIPLLIEFFMNTVSKRLNKRKVEIPEEYLENLINY
NWPGNIRELENVIELIINTESMPLNLEKRSIKPETDFIEIEEENLKLEYIEKKHILSVLG
KFKGNVTSASKALGVGRNTLYRKLEKYNVEISSLK
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaagtacggagcctaaaccacataaacaatatattgttcaatctcatgaaagatgt
tcttctcaaggtattgataagggtttggtatacagtagaaaaatattaagtgggaaaaaa
ttgagtgaaaaattggaagagaagaaagaactaattgtaattgccactccatttatgaat
tcactttataactgtgttaaaggttctaatttttttgcgattattactgatgaagaaggt
tgtattttaaatgttatgggtgataagggaattgtagatgaagcttataagcttaaaatg
gtaccaggtgcctatatgaatgaagagaatatcggaacaaatgcaatgagtttggcttta
acacaaaaagttccagtacaagtttcaaataatgaacattatcttgagtcgtatcacaaa
tggacatgttcttgttgccccattaaagatactaaaggtaatataataggaacaatagat
ttaacaggatacagtgaaaatgttcatccccatacattaggtatggtggttgctgctgct
aagttcatagaaaaaatgttggaaattaacaaatacaatgaggcattaattcacaataat
aatcatattaaaactatattcaatacgatttcaaaaggtattataacattagatttatca
ggaacaattaaaactacaaataaaattgctaatgaaatgtttgggtttagtcaaactaaa
atcttggaaatgaaaatttgggatcttgtagagggatggcaggaaattttagatacctta
tattctgaaaaaaactttattgatgaagatgtttatataaagtcaaaaaagaataaactg
cagcttaatgtaagtgcacatccaattctagattctgaaaagagaattcaagaaataatc
cttgtttttcaggaattaaagaaggtaaggaaattagcaggaagaatatcttctggacat
gctgtttacactttcaataaaattattggagagaatcaagagttcttaaaagtaataaat
tattgtaataaaatagctaatagtagatcaactatattgataacaggtgaaagtggtaca
gggaaagaagtattcgctcaatctattcataatgccagtgatagaagagatgaacctttt
atagctgtaaattgtggcgcaattcctagaagtttaatagagtcagagctatttgggtat
gaagatggggcttttacaggggctaaaagaggtggatgtccaggaaaatttgaaatagct
gatggtggaactatatttctagatgaaataggtgaaatgtctttagatatgcagactaaa
cttttaagagtaattgaggaaaaagttattaatagaattggaggaaggaatcctatacct
gttaatgtgcgaattattgcagctactaataaaaatttaaaagctgaggtggaaaaagga
aattttaggaatgatttattctacagattaaatgttcttccagtatatttaccaccatta
agggataggaaagatgacataccattattaatagaattttttatgaatactgtatcaaaa
cgtttaaataagagaaaagttgaaatacctgaggaatacctagagaatttaataaactat
aattggccagggaatataagagaacttgagaatgtaatagagttaataattaacactgaa
tctatgcctttaaatttagaaaaaagatcaataaaacctgaaacagattttattgagatt
gaagaggaaaatttaaaacttgaatatatagagaaaaaacatatattaagtgtcttagga
aaatttaaaggtaatgtaacttctgcttctaaagcattaggggtggggagaaatacactt
tacagaaagcttgaaaaatataatgttgaaatttcatcattgaaataa
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