Oceanirhabdus sp. W0125-5: OW730_14150
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Entry
OW730_14150 CDS
T08747
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ocw
Oceanirhabdus sp. W0125-5
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocw03016
]
OW730_14150 (truB)
Enzymes [BR:
ocw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OW730_14150 (truB)
Transfer RNA biogenesis [BR:
ocw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OW730_14150 (truB)
Prokaryotic type
OW730_14150 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF1359
Motif
Other DBs
NCBI-ProteinID:
WBW94837
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All DBs
Position
3071363..3072235
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AA seq
290 aa
AA seq
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MNGIININKPKGITSFDVVRIIKKTLKMKKVGHTGTLDPMAEGVLPICIGKATKFAELIM
SEEKVYRAEMKLGEITDTYDIEGEITETFDFSHVTEEEVIKVVNSFIKTYEQIPPIYSAI
KVAGKRLYEYAREGKEVEIKGRKITIHNINNIEVNLPYIKFDVKCSKGTYIRSLCFDIGK
ELNAGGVMTSLIRLKSGIFNIEDSVEISEIEKKDIQDNIISIENIFSHLNELNLNEKFSK
LVSNGVVIKDKALISSLEKNKQYRVYSFEREFIGLGELGENGFKIFKRYS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaataatcaatataaacaaaccaaagggaataacatcttttgatgttgttcga
attatcaaaaaaacattaaaaatgaaaaaggtaggtcatactggaactctagatccaatg
gcagaaggggttctgccaatttgcattggaaaagctacaaaatttgctgagctaattatg
tctgaagaaaaggtttatagggcagaaatgaagttgggagagattacagatacttatgac
attgaaggagaaattacagagacttttgatttttcacatgtaactgaagaagaagttatt
aaagttgtaaactcattcattaaaacctacgagcaaattccaccaatttactcagctatt
aaagttgccggaaaaaggttgtatgagtatgcaagagaaggtaaagaagttgagataaaa
ggaagaaaaataactatacataatattaacaatattgaagtgaatcttccttatattaaa
tttgatgtaaaatgttctaaaggtacatatatcagaagtctgtgctttgatattggaaaa
gagctaaatgctggaggggttatgacctctcttataaggcttaagagtggtatttttaat
attgaagattctgttgagataagtgaaattgagaagaaggatattcaagataatattatc
tcaatagaaaatattttcagccatcttaatgagcttaatcttaatgaaaaattttctaaa
ttagttagtaatggagttgttatcaaagataaagctcttataagttcgttagaaaagaat
aaacaatacagagtgtatagttttgaaagagaatttattgggctgggagagcttggtgaa
aatggattcaagatattcaaaagatatagttag
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