Oceanirhabdus sp. W0125-5: OW730_14580
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Entry
OW730_14580 CDS
T08747
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element RNA-guided endonuclease TnpB
KO
K07496
putative transposase
Organism
ocw
Oceanirhabdus sp. W0125-5
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
OW730_14580 (tnpB)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
DZR
RUBY_RBDX
HhH-GPD
Zn_ribbon_8
RuvC_1
Motif
Other DBs
NCBI-ProteinID:
WBW99756
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Position
3164553..3165644
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AA seq
363 aa
AA seq
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MNKAYKFRIYPNENQIEIIEKSFGCSRYVYNHFLNQRNEIYKAEKRCMKYTEQQNQLPSM
KKELVWLKEVDSTSLQMSLRNLDAAFKNFFEGRADRPKFKSKRENYKSYTSNFVNNNIEI
KKDKIKLPKLKYVNAKIHRYVEDRVINATVSKTSSGKYFVSICVETKIESLKKVSGNVGI
DLGLCHFAILSNGEKIQNPKYLKKSLDKLAKEQRKLSSKEKDSNNWNKQRIKVARLHERI
SNQRLDFIHKLSKRIISDNQVIILEDLSVKNMMKNDKLAQSISDVSWYKFVTILDYKAKW
HGRKIHKINRWYPSSKTCNNCGHVLDEMPLHIREWKCPKCDSIHDRDINASRNILKKGLL
EIA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atcaacaaagcgtataaattcagaatatatccaaatgaaaatcaaatagagattattgaa
aaatcttttggttgttcaagatatgtatataatcatttcttaaaccaaaggaatgaaata
tataaagctgaaaaaagatgtatgaaatatacagaacaacaaaatcaattaccaagtatg
aaaaaagaacttgtgtggcttaaagaagttgatagtacatcactgcagatgtcactaaga
aatcttgatgctgcattcaaaaatttctttgaaggtagagcagacagaccaaaattcaaa
agtaaaagagaaaactataaatcatatacaagtaattttgtgaataacaatattgaaata
aaaaaagataaaataaaactgcctaaattgaaatatgttaatgcaaaaattcatagatat
gttgaagatagagtaataaacgctactgtttctaaaacatcaagtggtaaatattttgta
tctatatgtgttgaaacaaagatagagtcattaaaaaaagtatcggggaatgttggtata
gacttagggttatgtcattttgcaatattatcaaatggtgaaaagattcaaaatcctaag
tatctaaaaaagtcattagataaattggcaaaggaacaaagaaaattaagtagtaaagaa
aaagacagtaacaattggaataagcaaagaataaaggttgctagactacatgaacgtata
tctaatcaaagattagacttcatccataagttatctaaaagaattataagcgataatcaa
gttataattcttgaagatttatcagttaaaaatatgatgaagaatgataaattagctcaa
agtatttcagatgtaagttggtataaatttgttactattctagattataaagcaaaatgg
catggaagaaaaattcataaaataaatagatggtatccatcatctaaaacatgcaataat
tgtggtcatgttttagatgaaatgccactgcatataagagaatggaaatgtcctaaatgc
gatagcattcatgatagggatataaatgccagtaggaatatcttaaagaaagggttatta
gaaatagcctaa
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