Oceanirhabdus sp. W0125-5: OW730_15595
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Entry
OW730_15595 CDS
T08747
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ocw
Oceanirhabdus sp. W0125-5
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocw03016
]
OW730_15595 (miaB)
Enzymes [BR:
ocw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
OW730_15595 (miaB)
Transfer RNA biogenesis [BR:
ocw03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
OW730_15595 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WBW95108
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All DBs
Position
3381713..3383038
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AA seq
441 aa
AA seq
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MLKYYIETWGCQMNEEDSEKISGMLKIKNYTYTKNRKEADIIIFNTCCVRENAELKVYGH
LGALKKLKMEKPELVIAVTGCMMQQPGMKDEVIKKFPYVDIIIGTHNSYKFPEYLTKVLS
GERPVLEIWDKEKSLEEIESNLPIDRKNPYKAFVTIMYGCNNFCTYCIVPHVRGRERSRK
PEDIINEIKELVSKGYKEVTLLGQNVNSYGKGLNDELSFADLLRMINKIDGLERVRFMTS
HPKDLSDDVIDAIAECDKLCEQIHLPVQSGSSNILKRMNRHYTKESYLELVEKIKNRIPN
VALTTDLIVGFPGETEEDFEETLDLCKKVEYDAAYTFLYSKRTGTPAAEYENQVPEDVKH
ERFNRLLDVINERTIKNNLEYKDRTVEVLVEGTSKNNDTMLMGRTRNGRLVNFSGSKDSI
GQIVNVKITSPKSFSLMGEQV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaatattacattgagacttggggttgccaaatgaatgaagaagattctgaaaaa
atctcaggtatgttgaaaataaagaattacacatatacaaaaaataggaaggaagctgac
attattatcttcaacacatgttgtgtaagagagaatgctgagcttaaagtttatggtcac
ttaggtgctctaaaaaaattaaagatggaaaaacctgaattagttattgctgttacagga
tgtatgatgcagcaacctggtatgaaagatgaggtaattaaaaaattcccatatgtagat
ataataataggaactcataactcatacaaattcccagaatatttaactaaagtacttagt
ggtgaaagacctgttttagaaatctgggataaagaaaaaagtttagaggaaattgaatca
aatcttcctattgatagaaagaatccttataaagctttcgttacaattatgtatggttgt
aacaatttctgcacatattgtattgttccacatgttagaggacgtgaaagaagcagaaag
ccagaagacattataaatgaaattaaagaacttgtatcaaaaggatataaggaagttact
cttcttggtcaaaatgttaactcttatggaaaaggattaaatgatgagttatcatttgca
gatcttttaagaatgattaacaaaatagatggattagaaagagttagatttatgacttca
catccaaaggatttatcagatgatgtaatagatgctattgctgaatgtgataaactttgt
gaacaaattcatttacctgttcaaagtggttcatcaaacatcctgaagagaatgaataga
cattacactaaagaaagctatcttgagcttgttgagaaaataaagaatagaattcctaat
gtagctttaacaactgacttaatagttggtttccctggtgaaactgaggaagactttgag
gagacattagatctttgcaaaaaagtagaatacgatgctgcttatacattcttatattct
aaaagaacaggtacacctgctgcagaatatgaaaatcaagtacctgaagatgttaagcat
gaaagatttaatagattattggatgttattaatgaacgtacaattaaaaataacttagaa
tacaaagacagaactgttgaagttttagttgaaggaacttctaaaaacaatgatactatg
ttaatgggtagaactagaaatggtagattggtaaacttctcaggttcaaaagatagcatt
ggtcaaattgtaaacgtaaaaattacttcgccaaaatctttctcattaatgggtgaacaa
gtgtaa
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