Oceanirhabdus sp. W0125-5: OW730_17565
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Entry
OW730_17565 CDS
T08747
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
ocw
Oceanirhabdus sp. W0125-5
Pathway
ocw00010
Glycolysis / Gluconeogenesis
ocw00020
Citrate cycle (TCA cycle)
ocw00620
Pyruvate metabolism
ocw00650
Butanoate metabolism
ocw00720
Other carbon fixation pathways
ocw01100
Metabolic pathways
ocw01110
Biosynthesis of secondary metabolites
ocw01120
Microbial metabolism in diverse environments
ocw01200
Carbon metabolism
ocw01210
2-Oxocarboxylic acid metabolism
Module
ocw_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
OW730_17565 (nifJ)
00020 Citrate cycle (TCA cycle)
OW730_17565 (nifJ)
00620 Pyruvate metabolism
OW730_17565 (nifJ)
00650 Butanoate metabolism
OW730_17565 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
OW730_17565 (nifJ)
Enzymes [BR:
ocw01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
OW730_17565 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
TPP_enzyme_C
Fer4_10
Fer4_8
Fer4_9
Fer4_16
Fer4_6
Fer4_21
Fer4
Fer4_2
Fer4_4
Fer4_17
KorB
Transketolase_C
DUF4368
Motif
Other DBs
NCBI-ProteinID:
WBW95489
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All DBs
Position
complement(3758318..3761836)
Genome browser
AA seq
1172 aa
AA seq
DB search
MNRIMKTMDGNTAASHVAYAYTDVAAIFPITPSSPMGEKADEWASQGRKNIFGQEVKVVE
MQSEAGAAGAVHGSLQGGALTTTFTASQGLLLMVPNMYKMSGELLPGVFHVSARALAAQA
LSIFGDHQDVMAARQTGFALLASNSVQQAMDLAAVAHIGAIKGKVPFLHFFDGFRTSHEL
QKIEVWDYDQLAELASDCMDDIKAFRKNSLNPEHPVTRGTAQNPDIYFQAREACNPYYDR
LPEIVEETMNKVNAMIGTDYKLFNYYGAEDAEKVIIAMGSVCETVEETVDYLVGKGEKVG
LLSVHLYRPFSIKHFLGQMPKTVKKIAVLDRTKEPGSTGEPLYLDIRDAYYNEENRPVIV
GGRFGLGSKDTTPAQIVAVYDYLNSDSLKTGFTVGINDDLTNTSIPVGETIDIAAQSTKA
CQFWGLGSDGTVGANKSAIKIIGDKTDMYAQGYFSYDSKKSGGITISHLRFGKEKIKSTY
LINKADYVACHNQAYVDKYNVLRSIKDNGIFLLNTLWNAEELEEKLPAKMKKYIAEHGIK
FYTLNAVKIAQEIGLGGRINMIMQSAFFKLADIIPMEDAVKYLKEAVVASYGKKGEKIVK
MNHDAIDRGIESIVEVNVPEAWKNITVEEAQVDEDRWDFMVEIADVMNAQEGDILPVSAF
AEKADGTFPQGTSAYEKRGIGVNVPEWLSENCIQCNQCSYVCPHAVIRPFLLNDEEVKNA
PEGMKVLDTKGKAFEGLKYSMGVSPLDCTGCGNCVDICPAPKKALAMEPLATQEVEQERF
EYLVKLPEKQNPMKKTTLKGSQFEKPLFEFSGACAGCGETPYAKLITQLFGDRMIIANAT
GCSSIWGGSAPATPYTTNDKGHGPAWANSLFEDNAEYGYGMYLAVAQMRDRLLILADEAQ
NSDLSEELKSTLAEWKENFKDGEKGKEIRDRLLPLLEAEKSNPIAEEILEKKEYLVKKSV
WIFGGDGWAYDIGYGGVDHVLASGDDINILVMDTEVYSNTGGQSSKATPTAAIAKFAAGG
KRTKKKDLGMMAMSYGYVYVSQISMGADKNQTIKAITEAENYDGPSLVIAYAPCINHGIK
KGMGKTQDEMKKAVECGYWALYRYNPTVKEEGKNPFTLDSKEPTGDFQEFIKGEVRFAAL
EKVKPEIAQQLFDKVEVDAKERLENYKKLANQ
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaataatgaaaactatggatggtaatactgctgcatctcacgttgcttatgct
tatactgacgttgcggctatattcccaatcactccatcttctccaatgggagaaaaagct
gatgagtgggcatctcaaggaagaaagaacatctttggccaagaagttaaagttgtagag
atgcaatcagaagctggtgctgctggtgcagtacatggatcattacaaggaggagcttta
actactactttcacagcttctcaaggattattacttatggttcctaacatgtataaaatg
tctggagaattattaccaggtgtattccatgttagtgcaagagcacttgctgctcaagct
ttatcaatctttggtgatcaccaagatgttatggctgcaagacaaacaggatttgcttta
ttagcatctaacagtgtacaacaagctatggacttagctgctgttgctcatatcggtgct
ataaaaggaaaagttccattcttacacttcttcgatggattcagaacatcacacgaatta
caaaaaattgaagtatgggattatgatcaattagctgaattagcttcagattgtatggat
gacattaaagcattcagaaagaattctttaaatcctgagcaccctgttactagaggtact
gcacagaatcctgatatctacttccaagctagagaagcttgtaacccttactatgataga
ttacctgaaatagtagaagaaactatgaataaagttaatgctatgattggtactgactac
aaattattcaactactatggagcagaagatgctgagaaagtaatcattgcaatgggatca
gtttgtgaaactgttgaagaaactgtagattacttagtaggaaaaggtgaaaaggttggt
ttattatcagttcacttatacagacctttctctattaagcacttcttaggacaaatgcct
aaaacagttaagaaaattgctgtattagacagaactaaagagccaggttcaacaggagag
cctctatacttagatattagagatgcttactataacgaagaaaacagaccagttatcgtt
ggtggtagattcggtcttggatctaaagatacaactccagcacaaatcgttgctgtatat
gattacttgaattctgattctcttaagactggattcactgtaggtattaacgatgattta
actaatacttcaattccagttggtgaaacaattgatatagctgctcaaagcactaaagct
tgtcaattctggggacttggatcagatggtactgttggagctaacaagagtgcaatcaaa
attatcggtgataaaactgatatgtacgctcaaggttatttctcatatgactctaagaag
tctggtggtattacaatatcacacttaagatttggtaaagagaaaatcaaatctacatac
ttaattaataaagctgactacgttgcttgtcacaaccaagcgtatgttgataaatataat
gttttaagaagcattaaagataatggtatattcttacttaacactctttggaatgcagaa
gagttagaagaaaagttaccagctaaaatgaaaaaatacattgcagagcatggaatcaag
ttctacactctaaacgctgttaaaatagctcaagagattggtcttggtggaagaattaac
atgataatgcaatcagcattctttaagttagcagatattattcctatggaagacgctgtt
aagtatcttaaagaggcagttgtagcttcttacggtaaaaaaggtgagaagattgttaag
atgaaccatgatgctattgacagaggaattgagtcaatcgttgaggttaatgttccagaa
gcttggaaaaacataactgttgaagaagcacaagttgatgaagatagatgggatttcatg
gttgaaatcgctgacgttatgaatgctcaagaaggagatattcttcctgttagtgcattt
gctgagaaagctgatggtactttcccacaaggaacatctgcttatgagaagagaggtatc
ggtgtaaacgtaccagaatggttatcagaaaactgtattcaatgtaaccaatgttcatac
gtatgtccgcacgctgtaatccgtccattcttattaaatgatgaagaagttaagaatgct
ccagaaggaatgaaagttcttgacactaaaggtaaagcatttgaaggattaaagtactct
atgggtgtatcacctctagactgtactggatgtggaaactgtgttgatatttgtccagct
cctaagaaggctctagctatggaaccacttgcaactcaagaagtagaacaagaaagattt
gagtacttagttaaactacctgagaagcaaaatcctatgaagaaaactactcttaaagga
agccaatttgagaagccattatttgagttctctggtgcttgtgctggatgtggagaaact
ccatatgctaaacttataactcaattattcggagatagaatgatcatagctaatgctact
ggatgttcttcaatctggggtggaagtgctcctgcaactccatacactactaacgataaa
ggacatggaccagcttgggctaactctttattcgaagataatgcagagtatggatacggt
atgtacttagctgttgctcaaatgagagatagattattaatattagctgatgaagctcaa
aacagtgatttaagcgaagagttaaaatctacattagctgagtggaaagaaaactttaaa
gatggtgaaaaaggtaaagaaatcagagatagattattaccattattagaagcagaaaaa
tctaacccaatcgcagaagaaatcttagagaagaaagaatacttagttaagaaatctgtt
tggatatttggtggagacggatgggcttatgacatcggttacggtggagttgaccacgtt
cttgcttcaggtgatgatattaacattcttgtaatggatactgaggtttactctaacact
ggaggtcaatcttcaaaagctactccaactgctgctatagctaaatttgctgctggtggt
aagagaactaagaagaaagatcttggtatgatggcgatgagctatggttatgtatatgta
tctcaaatttctatgggtgcagataagaaccaaacaatcaaagctatcacagaggctgaa
aactatgatggaccatcattagttattgcttacgctccatgtatcaaccatggaatcaaa
aaaggtatgggtaaaactcaagacgagatgaaaaaagcagtagagtgcggatactgggca
ctttacagatacaacccaactgttaaagaagaaggaaagaatccatttacattagattct
aaagagccaactggtgatttccaagagtttattaaaggtgaagtaagattcgcagctctt
gaaaaagttaagccagaaatcgctcaacaattatttgataaagttgaagttgatgctaaa
gaaagacttgaaaactacaagaagttagctaatcaataa
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