Oceanirhabdus sp. W0125-5: OW730_19015
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Entry
OW730_19015 CDS
T08747
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
ocw
Oceanirhabdus sp. W0125-5
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocw03000
]
OW730_19015
Transcription factors [BR:
ocw03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
OW730_19015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_DeoR
HTH_PafC
Sigma70_r4
MarR
Dimerisation
DUF977
GntR
HTH_20
HTH_Tnp_1_2
HrcA_DNA-bdg
HTH_7
HTH_24
HTH_5
Put_DNA-bind_N
Rrf2
TFIIE_alpha
HTH_Mga
HTH_65
DUF3489
CggR_N
Fe_dep_repress
HTH_Crp_2
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
WBW95765
LinkDB
All DBs
Position
complement(4089410..4090045)
Genome browser
AA seq
211 aa
AA seq
DB search
MKKMRLTSRQEQIIDLVKENQPITSEQIASKLNVTRATLRPDLAILTMSGILDAKPKVGY
IYANKPSYSVLYDYLNKTKVKKVMTKAVLLNEDEWVYDGIVTLFLNDTGTLYVENDGKLV
GVVSRKDFLKIAMGGSDLHKVPLGIIMTRMPNIVYTTKDESVYEAAKKIIEHQIDSLPVI
DKESDKDGFHVIGKISKTNITKILIDLCEEK
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaaatgaggttaacatcgagacaagaacaaattatagatctggtaaaagaaaat
caacccataacaagtgagcaaattgcttcaaagcttaatgttacaagagctacacttaga
cctgatttagcaatattgacaatgagtggaattttagacgccaaacctaaggttggatac
atttatgcgaataaaccctcttattctgtattgtatgactacttaaacaaaactaaggtt
aaaaaggttatgacaaaggctgtattacttaatgaggatgaatgggtatatgacggcatt
gttacgcttttcttaaatgatactggaacactttatgtagaaaatgatggcaaacttgta
ggagtggtttcaagaaaagatttcttgaaaattgcaatgggtggatctgacttacataag
gttccattaggaattattatgacaagaatgcctaatattgtttatacaactaaagatgag
agtgtttatgaagcggcaaaaaaaataattgaacaccaaattgatagtttacctgtaatt
gataaggagtcagataaagatggattccatgttattggaaaaatatctaaaacaaatata
acaaaaatattaatcgatttatgtgaagaaaaataa
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