Oceanirhabdus sp. W0125-5: OW730_19545
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Entry
OW730_19545 CDS
T08747
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ocw
Oceanirhabdus sp. W0125-5
Pathway
ocw00550
Peptidoglycan biosynthesis
ocw01100
Metabolic pathways
ocw01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OW730_19545
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OW730_19545
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ocw01011
]
OW730_19545
Enzymes [BR:
ocw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
OW730_19545
Peptidoglycan biosynthesis and degradation proteins [BR:
ocw01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
OW730_19545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WBW95863
LinkDB
All DBs
Position
complement(4194174..4197056)
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AA seq
960 aa
AA seq
DB search
MNVDLETEILNRREVKGEKENLRYTAMIIIMLLIFGGIIARLINLQVINVNMYREYASTG
SHTMISYSAPRGRIYDRNDEVLATNKLGYTLTFTETKESNKKFFDTMKEVFEILEKNGEK
TTEGFQLKVDPIRFEFGVSDDYKIWSELRFKKDRGFDYEVLHKDFSGKKMVDLNQSEISY
IDEKLKEMSPEYIYRSLIKKYELYNMIRDDYSKEEWNSLTNKNKLVDELIDKVDGSVIRK
YMIIKDSIYMNRFNGNKPSVIAKDLKPETSYIFEQIQSEMPGISIQKQPIRYYPYNEVAS
NIMGYVGKIGEHNKERYEERGYDISDDYIGITGLESVFEDVLRGRRGEESIKVNLDGRKV
KTLGERPATPGNSIKLTIDYKLQRTAERALDETMKYMRDLGKFTSRGTEDDVDKSNATRG
AAVVLNVNTGEILALASRPGIDLNLHTFPGRLDNETYKEIFMPDIEKFGLEYIYKHELYK
QEKFNGITLQGKPMWEKIKIIMDEMYPKDNNGYRSDDKDTRPNPAYNYATQSLIPPGSTF
KILSAIAGLEEGVITPEEKIYDAGQYKKRYKDFTGASWMYNVHKSSHGYQNIVEAIRDSN
NYYFYEVADRLFEKKGPGSKESLDALAEYAWKFGLGANMEDENRDLETGIEISEKFGPVY
YYDFGKRENSRDYTRKVYELLNKGESSIWVGEYKPIDIIPNINNDSEEVYKIKKELTSCI
KAQMVSEEKFDITDIGLKVRELIENKEEYQNEYSEKDIEGIIKTITASLFDARSENKSGV
NLYNASIGQGKSQFTPLQLANYVATLVNGGYRREVYLVKEILDEDGNIIEDCSKNKKIIN
ETGISKETIDIVKEGMLQVTSSIYGTAYTPFKGLPIKNGAKTGSATFQNNQEEFGRTSYA
TFIGFAPYDNPEIAVSVVVFDGGHGGYSARVARAIYEEYFKDEILKINPEYEFMLEETEK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtagatcttgagacagagatattaaatagaagagaagtaaagggtgagaaagaa
aatttaagatacacggcaatgattattattatgttattgatatttggaggaattattgca
aggttaataaacttacaagttataaatgttaatatgtatagagaatatgcaagtactggt
agtcatacaatgatatcatattctgcaccaagagggagaatttacgacagaaatgatgag
gtactggctactaataaattgggatataccttgacttttacagagacaaaggaaagtaat
aaaaagttttttgatacaatgaaagaggttttcgagattttagaaaaaaatggagagaaa
actacagagggatttcaattaaaggttgacccaataaggtttgagtttggagtaagcgat
gattataaaatatggagtgaattaagatttaaaaaggatagagggtttgattatgaagta
ttacataaagattttagcggcaaaaaaatggttgatttaaatcaaagtgaaattagttat
attgatgagaaattgaaagagatgtctccagagtatatttataggtcacttataaagaag
tatgaattatacaatatgataagagatgattactcaaaggaagagtggaatagtcttaca
aacaaaaataaacttgtagatgaattaatagataaggttgacggaagtgtaataagaaaa
tatatgattattaaagatagtatttatatgaatcgttttaatggtaataaaccaagtgta
attgcaaaagatcttaaacctgaaacttcatatatctttgagcaaattcaatctgaaatg
cctggaatttcaatccaaaaacaacctataagatattatccttataatgaagttgcttca
aatataatgggttatgttgggaaaattggtgagcacaacaaggaaaggtatgaagaaaga
ggatatgacattagtgatgattatataggaataacaggattagaaagtgtttttgaggat
gttttacgaggaagaagaggggaagagagtattaaagtaaatctggacggtagaaaagta
aaaacacttggagaaagacctgcaacgcctggaaattcaatcaaacttacaattgattat
aaacttcagaggacagctgagagagcattggatgaaacaatgaaatatatgagggatctt
ggaaagtttacctcacgaggaacagaagatgatgttgataaatcaaatgcaactagagga
gcagctgttgtattaaatgtgaatactggtgaaattcttgcacttgcaagcagaccagga
attgatctcaatcttcatacatttccaggaagacttgataatgaaacatataaagaaatt
tttatgcctgatattgaaaagtttggacttgagtatatatataaacatgagctttataaa
caagaaaaattcaatggtataactcttcagggtaagcctatgtgggaaaaaatcaaaata
ataatggatgagatgtatcctaaggataataatggatatagatcagatgacaaagatact
aggccaaatccagcttataattatgcaacgcaatcacttatacctccagggtctacgttt
aaaattctatctgcaattgcagggttagaagagggagttataactccagaggaaaaaata
tatgacgcaggtcaatataaaaagaggtataaagactttactggagcaagttggatgtac
aatgtacataaaagcagtcatggatatcaaaatattgttgaagctataagagattctaat
aactattacttctatgaggttgccgatcgactatttgaaaagaaaggtccaggatctaag
gaaagcttagatgcattggcagaatatgcttggaaattcgggttgggtgctaatatggaa
gatgaaaatcgtgatctagagactggtatagaaataagtgaaaaatttggtccagtttat
tattatgattttgggaagagagaaaatagtagagattatactcgaaaagtatatgaactt
cttaacaaaggagaatcatcaatatgggttggggaatataagccaattgatataatacct
aatataaataatgatagtgaagaggtatataaaataaagaaggagttaactagctgtata
aaagctcaaatggtcagtgaggagaaatttgatattactgatataggtttgaaagttaga
gaactgattgagaacaaagaagaatatcagaatgaatatagtgaaaaggatattgaaggg
attataaaaactattacagcgtccttatttgacgccagatcagagaataaaagtggtgta
aatctatataatgcttctattggtcagggaaagagtcagtttactccgctgcagctggct
aattacgttgctactcttgttaatggtggatataggagagaagtatatcttgtaaaagaa
atattggatgaagatggtaatataatagaagattgttctaaaaataaaaagataatcaat
gaaacaggtattagtaaagaaactatagatattgtaaaagaaggaatgcttcaggttaca
agtagcatttatggtacagcatatacgccatttaaaggtttacctataaagaatggagca
aaaacagggtcagcaacattccagaataatcaagaggaatttggaagaacatcttatgct
acatttataggatttgcaccatatgataatcctgaaattgcagtgagtgtagtggttttt
gacggtggacatggtggatatagtgcacgtgtggctagagccatatacgaagaatatttt
aaagatgagatattaaaaataaatcctgagtatgagtttatgcttgaagaaacagaaaaa
taa
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