Oceanirhabdus sp. W0125-5: OW730_19645
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Entry
OW730_19645 CDS
T08747
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ocw
Oceanirhabdus sp. W0125-5
Pathway
ocw03030
DNA replication
ocw03410
Base excision repair
ocw03420
Nucleotide excision repair
ocw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OW730_19645 (polA)
03410 Base excision repair
OW730_19645 (polA)
03420 Nucleotide excision repair
OW730_19645 (polA)
03440 Homologous recombination
OW730_19645 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocw03032
]
OW730_19645 (polA)
03400 DNA repair and recombination proteins [BR:
ocw03400
]
OW730_19645 (polA)
Enzymes [BR:
ocw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OW730_19645 (polA)
DNA replication proteins [BR:
ocw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OW730_19645 (polA)
DNA repair and recombination proteins [BR:
ocw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OW730_19645 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OW730_19645 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
XPG_I
Motif
Other DBs
NCBI-ProteinID:
WBW95882
LinkDB
All DBs
Position
complement(4214653..4217265)
Genome browser
AA seq
870 aa
AA seq
DB search
MERIVILDCNSLMYRAFYGLPPLTNSEGLTTNAIYGISTMLFKIKEEFEPKYIAAAFDRK
APTFRHIEYKEYKAGRKKMPPELAEQIPYIKEFLENFGAAKFEIDGFEADDIIGTIARKA
ESEGKEVYIVTGDKDALQLASDNIKVVINKKGMTQVEVYDRERIIQDIGVTPTEFIDVKG
LMGDKSDNIPGVPGVGEKTAIKLIQEYHTVENILENLDKVKAKKLNENLTNYAEQAIFSK
KLATINTEVPIGFTMDEMDFEKNRDISKLREMFYKFQFKSLISKIGDAPVECEEITVEAK
DVDTIDGLKKLTASIQKEDTLFILHKVENDNKFTELELVDLHVSDGETIYHVDVKGILNE
SREDAIEELRKIFSNDLNVVGHEVKHLYTALRKLGIEDFLFSFDCEIAAYLIDPGKKGYS
LESLIEGHLHKGINGDNKEIELIHYLSEIYTLLKNKAEELDINKLLYEIEIPLTKVISDM
EFEGFRVDSEMLKELGEKFNKEISTTEKEIYDLCGEEFNIKSPKQLGKILFEKLDLPVIK
KTKTGYSTNAEVLEKLQDKHPVIEKILFYRQITKLNSTYVEGLQNVIDEDNKIHSSFNQT
VTTTGRLSSTEPNLQNIPVKYEMGREIRKVFIPEEDSIILSADYSQIELRVLAHISGDET
LIDSFKNEEDIHRRTASEVFGVPMDEVTSIMRSNAKAVNFGIVYGIGDFSLAKDLNITRK
EAKTYIDAYLNRYPKVKDYLDGIIEEAKKNGEVRTMLNRRRFIPELASSKKMMIAFGERL
AMNTPIQGSAADIIKMAMVNVWRKLKENNLKSKVILQVHDELLLNVVKGEEEVIINILQN
EMRAHVEKDIEFKVPMVIDINRGASWYEAK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggagagaatagttatactggactgtaatagtcttatgtacagggcattttatggtttg
ccacctttaacaaactcagaaggattaactacgaatgcaatatatggaatatctacaatg
ctatttaaaattaaagaggaatttgaacctaagtacatagcagcagcttttgatagaaaa
gctccgacttttagacatatagaatacaaagaatataaagctggaagaaagaaaatgcca
ccagagttagctgagcagattccgtacataaaagagttccttgaaaattttggagcagca
aaatttgaaattgatggatttgaagctgatgatataattgggacaattgctagaaaagct
gaaagtgaaggaaaagaagtttatattgtaacgggtgataaggatgcgcttcaacttgct
agtgataatattaaagttgttattaataaaaagggaatgactcaggttgaggtttatgat
agagagagaataattcaagatataggagttacaccaacagaatttattgatgtaaaggga
ttgatgggagataaatccgataatattcctggtgttcctggtgtaggagagaaaacggct
attaagcttattcaagaatatcatactgtggagaatatattagagaatcttgataaggta
aaagcaaagaagttaaatgaaaatcttactaactatgctgaacaggcaatattcagtaaa
aaattagctacaattaatacagaagtacctattggatttaccatggatgagatggacttt
gagaagaatagagacatatcaaaattaagagagatgttttataaattccagttcaaaagt
cttataagtaagataggtgatgcaccagttgagtgtgaagagataactgtagaggctaaa
gatgtagatacaattgatgggttaaaaaaattaacagcttcaatacaaaaagaggataca
ttatttattctccataaagttgagaatgataataagtttacagaacttgaattagttgat
ttacatgtaagtgatggagagactatatatcatgtggatgttaaaggtattcttaatgag
tcaagggaagacgccattgaagagttgagaaaaatattctcaaatgatttgaatgttgtt
ggacatgaggtaaagcatttatatactgcactaagaaaattaggtatagaggacttttta
ttctcatttgattgtgagatagctgcatatcttattgatccaggaaagaaaggatattct
cttgagagtttaattgaaggtcatttgcataagggaattaatggagataataaggagata
gaacttattcattatctttcagaaatatatactttgttaaaaaataaagcagaagaacta
gatattaataaattactttacgaaatagaaattccactaacaaaggttatttcagatatg
gaatttgaaggctttagagtagatagtgaaatgttgaaggagcttggtgagaaattcaat
aaagagatttcaacgacagaaaaagaaatatatgatctttgtggagaagagtttaatata
aaatcaccaaagcagttaggaaagatattatttgaaaaactagacttgcctgtaattaag
aaaacaaagacaggatattcaactaatgctgaggttcttgagaagcttcaagataaacat
cctgttatagaaaagattttgttctatagacaaataacaaaactaaattcaacttatgtt
gaagggctgcagaatgttatagatgaagacaataaaatacattcttcatttaatcaaact
gtaactactactggaagattatcaagtactgaacctaatcttcagaatatacctgttaag
tatgaaatgggtagggaaataagaaaagtatttattccagaggaagatagcataatttta
tcagcggactactctcagatagaacttagagtgcttgcacatatatctggagatgagacg
cttatagattctttcaagaatgaagaggatattcatagaagaactgcttctgaggtattt
ggcgttcctatggacgaggtaacttcaataatgagaagtaatgcaaaggcagtaaatttc
ggtatagtttacggtattggtgattttagtttagctaaggatttaaatattactagaaaa
gaagctaaaacatatatagatgcatatcttaatagatatccaaaagttaaagattatctt
gatggaattattgaagaggcgaagaagaatggcgaagttagaactatgttaaacagaaga
agatttattcctgaacttgcttcatcaaagaaaatgatgattgcatttggggagagactt
gccatgaatacacctattcaaggtagtgcagctgatataattaaaatggctatggttaat
gtttggagaaaacttaaagagaataacttaaagtctaaagttattttacaagttcatgat
gaattgttgcttaatgttgttaaaggtgaagaagaagtaattattaacattcttcaaaat
gagatgagagcacatgtggaaaaagatatagagttcaaagttcctatggttatagatatt
aatagaggggcatcatggtacgaagcaaaataa
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