Oceanirhabdus sp. W0125-5: OW730_24620
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Entry
OW730_24620 CDS
T08747
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K07729
putative transcriptional regulator
Organism
ocw
Oceanirhabdus sp. W0125-5
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocw03000
]
OW730_24620
Transcription factors [BR:
ocw03000
]
Prokaryotic type
Helix-turn-helix
Other families
OW730_24620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_26
HTH_Crp_2
Sigma70_r4
HTH_25
HTH_37
HTH_23
Crp
Trp_repressor
HTH_28
MarR_2
Motif
Other DBs
NCBI-ProteinID:
WBW96846
LinkDB
All DBs
Position
complement(5305235..5305453)
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AA seq
72 aa
AA seq
DB search
MDENIVLKNRLKVARAEKSYTQEQLANLCGVTRQTISSIETGQYCPTAKLALIICKVFEK
KFEEIFYFKEGN
NT seq
219 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaatattgtcttgaaaaataggttaaaggttgctagagctgagaaaagttat
actcaagaacaacttgctaatttatgtggtgtaacaagacaaaccataagttcaatagaa
actggacaatattgtccaacagcaaagttggcattaataatatgtaaagtttttgagaaa
aaatttgaggaaatattttattttaaggagggaaattaa
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