Oceanirhabdus sp. W0125-5: OW730_26210
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Entry
OW730_26210 CDS
T08747
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ocw
Oceanirhabdus sp. W0125-5
Pathway
ocw00300
Lysine biosynthesis
ocw00470
D-Amino acid metabolism
ocw01100
Metabolic pathways
ocw01110
Biosynthesis of secondary metabolites
ocw01120
Microbial metabolism in diverse environments
ocw01230
Biosynthesis of amino acids
Module
ocw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OW730_26210 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OW730_26210 (lysA)
Enzymes [BR:
ocw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
OW730_26210 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WBW97153
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All DBs
Position
complement(5643398..5644699)
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AA seq
433 aa
AA seq
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MRFFGTMKMNNNGNLQIGGCDSVKLTKEFGTPLYVVDEDLIRGNCRTFKNNFAMEGIDTE
VIYASKAFLNLAICKLISEEGLSLDVVSGGELYTALRAEFPAQKIYMHGNNKTRDELIMA
IEAGIGRIVVDNRQELELLEYLCEELDKKIDVLLRVNPGIDAHTHEYIQTSKNDSKFGES
IFCEDICSLLSKFKNSRRVTLKGFHCHIGSQIFEEQSFYQGISVMLQFLDRVRVECGFIT
EELNLGGGFGVYYSKEDTPINLEKCLKDMILLIKEKTMHIGLNVPKIMIEPGRAIIANAG
TTLYEVGGTKLTYGGKHFIFVDGGMTDNPRTALYGAKYEAVIANKMNLENIETYTIAGKC
CESGDVLVKDIELPEVERKDILAVLSTGAYNYSMASNYNRIPRPAVVFVKDGNAKLTVKR
ETYEDILRNDLLI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagattttttggaacgatgaagatgaataacaatggtaatttacaaataggtggatgt
gattctgttaaattaacaaaagagtttggtactcctttatatgttgttgatgaagattta
attagaggaaattgtagaacttttaaaaataactttgccatggagggaattgacactgaa
gtaatctatgcatctaaagcttttttaaatttagccatttgtaagcttatatcagaagaa
gggctttctctagatgttgtgtcaggaggggaactgtatacagcgctaagggcagagttt
ccagcacagaaaatttatatgcatggaaataataaaacaagagatgaattgattatggct
atcgaagcagggataggacgaatagttgttgataatagacaggagctggagttattagaa
tatctatgtgaagaattggataaaaaaattgatgtattactaagggtaaacccaggaatt
gatgctcatactcatgaatatattcaaacttcaaagaatgattcaaaatttggagagtct
attttttgtgaagatatatgttctttattaagtaaatttaaaaatagtagaagagtaact
ttaaaaggatttcactgtcatattggatcacaaatttttgaggaacaatcattttatcaa
ggtatttcagtaatgcttcaatttctagatagagtaagagtagagtgtggttttattact
gaagagttaaatctaggtggaggatttggagtctactactcaaaagaagatacaccaatt
aatttagagaaatgtttaaaggatatgattttattaatcaaagagaagactatgcacatt
ggattaaacgtgcctaagatcatgattgaaccaggtagagcaataattgccaatgcagga
acaaccctttatgaagttggaggaactaaattaacttatggaggtaagcattttatattt
gtagatggaggaatgactgataatccccgaactgctttatatggtgcaaaatatgaagct
gttattgcaaataaaatgaatttagaaaatatagaaacatacacaattgcaggaaagtgt
tgtgaatcaggagatgtgttagtaaaagatattgaattacctgaagttgaaagaaaggat
attttagcggtacttagcacaggggcatacaattacagtatggctagtaattacaataga
attccaagaccagcagtagtgtttgttaaagatggaaatgcgaaattaacagttaaaaga
gaaacatatgaagatattcttagaaatgatttattgatttaa
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