Tepiditoga spiralis: OSSY52_01030
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Entry
OSSY52_01030 CDS
T06810
Symbol
rpiA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ocy
Tepiditoga spiralis
Pathway
ocy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OSSY52_01030 (rpiA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocy03400
]
OSSY52_01030 (rpiA)
Enzymes [BR:
ocy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OSSY52_01030 (rpiA)
DNA repair and recombination proteins [BR:
ocy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OSSY52_01030 (rpiA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
PriA_3primeBD
PriA_C
Zn_ribbon_PriA
AAA_19
zf-CHY
AAA_30
PIF1
Zn_ribbon_6
Anti-RecBCD_p2
PyrI_C
HypA
nSTAND6
Zn_ribbon_ISL3
Motif
Other DBs
NCBI-ProteinID:
BBE29962
UniProt:
A0A7G1G7G3
LinkDB
All DBs
Position
complement(104618..106885)
Genome browser
AA seq
755 aa
AA seq
DB search
MNYYEVIPFTNLDYYTYSTELKLEVGQRVMINLRNKMIPALIYKKVEKIPEFKVKEIEFI
IDELPLITFKHIKIIEEISKNFAISLGEASKLFFPPISSDMYKLKVVPISPLAPFQKPIF
LNEFYKNFKSKSVANKKIRELSKNGIVKLELHIKRTKEKKESFFKLNKSIEEIMKIKISN
TAMSVVNYLNMKDIINEKELYELGILKHGTTVLKTLMKKNIICEVNESQIYQYKKIILSD
EQQKVVNEINALNDKPHLLYGVTGSGKTEVFFEIAKPLLENGKKILITIPEISLTPQLVN
RIKNRFAEYNVSLYHSSLTSSEKLKTWYDSINGKTDIIVGTRSALFIPVKELGMIIMDEE
HDTSYYQSEGTIYDGVEAAFIRSKIENIKLVLASATPRVKDYYRAINNEFYMEKIEKRIF
SKMPEVEIINMKEEEKISWIFSKKVIKEIKKTLEKDKKIIIFTPTRGYANYIMCPDCGYI
FKCSECDVSLTFHKNDMKLKCHYCGKEEKVPSVCPNCGNVNLQSRGYGTERVVNELMKLF
PSEVILRVDRTVIRSYEELKKTFNYMKEPGKKIIVGTKMITKGLDIEDLHLVVVLDSDRY
SNFPDYSAYESTGALILQVGGRSGRKERGKVLIQTFKPEEELYKAAKNHDYTMILNHEIK
ERKEFRYPPFSDMIIIMVYEEDKKNCEKISREIFNEVKEITREIMGPVDPIISRIKNKYR
KQIILRGNINIESLRNVLKNFRNIKVYVNPPSTLL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaattattatgaagtaataccttttacaaatttagattattatacatattcaacagaa
ttaaaacttgaagttggacaaagagtaatgataaacttaagaaataaaatgataccagct
ttaatttataaaaaagttgaaaaaatacctgaatttaaagttaaagaaatagagtttata
attgatgaactacctttaattacttttaaacatataaaaataatagaagaaatatctaaa
aattttgctatttctcttggagaagcttcaaaattattttttcctcctatttcttctgat
atgtataaattaaaagtagttccaattagtccattagcaccatttcaaaaaccaatcttt
ttaaatgaattttataaaaattttaaaagtaagagtgtagcaaataaaaagattagagaa
ttatctaaaaatggaattgtaaagttagaacttcatataaaaagaacaaaagaaaaaaaa
gaaagtttttttaaattaaataaaagtattgaagaaattatgaaaataaaaatatctaat
acagcgatgtcagttgttaactacttaaatatgaaagatattataaatgaaaaagaactt
tatgaattaggtatattaaaacatggaactactgttttaaaaacattaatgaaaaaaaat
ataatttgtgaagtaaatgaatctcaaatttatcaatataaaaaaataattctttctgat
gaacaacaaaaagttgttaatgaaataaatgcgttaaatgataaaccacatttactttat
ggagttacaggaagtggaaaaacagaagtttttttcgaaattgcaaaaccacttttagaa
aatgggaaaaagatattaataacaataccagaaatttctctaactccacaattagtgaat
agaataaaaaatagatttgctgaatacaatgtttcgttgtatcattcatctttaacaagc
tctgaaaaattaaaaacatggtatgattcgataaatggaaaaacagatataattgttggt
acaagaagtgctttgttcataccagttaaagaacttggtatgataataatggatgaagaa
cacgatacttcttattatcaaagtgaaggaactatttatgatggagttgaagctgctttc
attagaagtaaaatagagaatataaaattagtattagcttcggctactccaagagtaaaa
gattattatagagctattaacaatgaattttatatggaaaaaatagaaaaaagaatattt
tctaagatgccagaagtggaaataataaatatgaaagaagaagaaaaaataagctggata
tttagtaaaaaagtgataaaagaaataaaaaaaactttagagaaagataaaaaaataata
atttttacaccgacaagaggatatgcaaattatattatgtgtccagattgtggatatatt
tttaaatgcagtgaatgtgatgtatctttaacttttcacaaaaatgatatgaaattaaag
tgtcattattgtggaaaagaagaaaaagttccaagtgtttgtccaaattgtggaaatgtg
aatcttcaaagccgtggatatggaactgaaagagtagtcaatgaattaatgaaactattt
ccatcagaagtaattttaagagttgatagaacagttattagaagttatgaagaacttaag
aaaacctttaattatatgaaagaacctggaaaaaaaataatagtaggaacaaagatgata
acaaaaggtttggatatagaagacttacatttggttgttgtcctcgattctgatagatat
tcaaactttccagattactccgcatatgaatctactggagctttaattttacaagttggt
ggacgttcaggaagaaaagaaagaggaaaagttttaattcaaacatttaaaccagaagaa
gagttgtataaagctgcaaaaaatcatgattatactatgattttaaaccatgaaataaaa
gaaagaaaagaatttagatatccaccattttctgatatgattattataatggtttatgaa
gaagataaaaaaaattgtgaaaaaatttcaagagaaatttttaatgaagtaaaagaaatt
acaagagaaattatgggaccagttgatccaataatttcaaggataaaaaataaatacaga
aaacaaataatattgagaggtaatataaatatagaaagtttaagaaatgttttaaaaaat
tttaggaatataaaagtttatgtaaatccaccaagtactttattataa
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