Tepiditoga spiralis: OSSY52_10310
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Entry
OSSY52_10310 CDS
T06810
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ocy
Tepiditoga spiralis
Pathway
ocy03420
Nucleotide excision repair
ocy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ocy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OSSY52_10310
03430 Mismatch repair
OSSY52_10310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocy03400
]
OSSY52_10310
Enzymes [BR:
ocy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OSSY52_10310
DNA repair and recombination proteins [BR:
ocy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OSSY52_10310
MMR (mismatch excision repair)
Other MMR factors
OSSY52_10310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_11
AAA_12
AAA_30
DEAD
ResIII
DUF190
NAT10_TcmA_helicase
AAA_14
Motif
Other DBs
NCBI-ProteinID:
BBE30890
UniProt:
A0A7G1G3B2
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All DBs
Position
1148376..1150334
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AA seq
652 aa
AA seq
DB search
MDEDIFELETNIPEFIKNELDSEQLEAVVNSRGRSLIIAGPGSGKTRVITYKIAYLMYNG
INPKNILLVTFTRAAAKEMIERVKNVTNSDIEEMTAGTFHHVCNAILRRYAGKLGYKNNF
TILDSEDAKDVLKIARNEYKENIGDRAQKLPKENVIMKIISYSKNTLKSLRESILEVSSN
LIEYENDIEYIWQKYAEIKKDINAMDYDDILVNTAVLFRMNKEILQFISSKYRYVLVDEF
QDTNKIQLEIVEALSSVHGNLIAVGDDSQSIYSFRGARFENVKEFMENSTLFKIQTNYRS
TPEIVNLVNEMIPLNSVHKTLKSVRNSIDKPIIIETFDDLEQSEAVVKIIKEKLDEGLEP
NEIAVLYRSHFLSMTLQQKLDSKKIPYRLLSGKRFIETAHIKDILSFLKIVQNPYDKISW
TRALKLFPKIGSKTAVRVYENIFDSLNDNKNLEIGLETSLLKKNKNVLNFFVELFKNNTA
SDIIEYVFKNHYKEYSKLTFKDSRSRNMDIERFIEIADKYETLEKFLEEMTLSENIKVSS
SRKEKEEKEVTLTTIHGSKGLEWKVVILISVNPGDFPNGMAIREKRIDEEERLFYVAITR
AKNELYILKQVTGTVNPYMRNSFVFMKKENDFIKRIPNQYIKKLKTGYKRYF
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatatcttcgaacttgaaactaatataccggaatttataaaaaatgaatta
gattcagaacaattagaagctgttgttaattcaagaggtagatctttgataatagctgga
cctggttcaggtaaaacaagagtaataacttacaaaatagcatatttaatgtataatggt
ataaatcctaaaaacatactattggtaactttcacaagagcagcagcaaaagaaatgata
gaaagagtaaaaaatgttactaattctgatatagaagaaatgacggcaggtacctttcat
catgtttgtaatgctattttgagaagatatgcaggaaaattaggatacaaaaataacttt
actatattagatagtgaagatgcaaaagatgttttgaaaatagcacgtaatgaatataaa
gaaaatataggagatagagctcaaaaacttccaaaagaaaatgtaattatgaaaataata
agttattctaaaaacacattaaaatctttaagagaaagtatattagaagtatcttcaaat
ttaattgaatatgaaaatgacattgaatatatatggcaaaaatatgcagaaataaagaaa
gatataaatgctatggactacgatgatattttagtaaatactgccgttttgtttagaatg
aataaagaaatattacaattcatttcatctaagtatagatatgttcttgtagacgaattt
caagatacaaataaaatacagttagagatagttgaagctttatcctctgttcatggaaat
ttaatagcagttggtgatgattcgcaaagcatctattcttttagaggagcaagatttgaa
aatgtaaaagaatttatggaaaattcaactttatttaaaattcaaacaaattatagaagt
acaccagaaatagtaaatttagttaatgaaatgattcctttgaattcagttcataaaaca
ttaaaatcagttagaaattcaatagataaaccaataattatagaaacttttgatgatctt
gaacagtctgaagccgttgttaaaataataaaagaaaaacttgatgaaggattagaacca
aatgaaatagcggtattgtatagatctcactttttatcaatgacattacaacaaaaatta
gattctaaaaaaattccttacaggcttttatctggtaaaagatttatagaaacagcacat
ataaaagatattttatcatttttaaaaatagttcaaaatccatatgataaaatatcgtgg
acaagggctttaaaactttttcccaaaataggaagtaaaacagctgtgagagtttatgaa
aacatatttgatagtttaaatgataataaaaatttagaaattggattagaaacctcatta
ttgaagaaaaataaaaatgtattgaatttttttgtagaattatttaaaaataatactgct
tctgatataattgaatatgtatttaaaaatcattataaagagtattctaaactcaccttt
aaagactcgcgttcaagaaatatggatatagaaagatttattgaaattgcagataaatat
gaaacccttgaaaaattccttgaagaaatgactttgagtgaaaatattaaagtttcatca
agtagaaaagaaaaagaagaaaaagaagttacattaacaacaatacatggatctaaagga
ttagaatggaaagttgttatattaatttctgtaaatccaggagattttccaaatggaatg
gcaataagagaaaaaaggattgatgaagaagagagattattttatgtagcaataacaaga
gcaaaaaatgaattgtatatattaaaacaagtaactggaactgttaacccttatatgaga
aattcatttgtttttatgaaaaaagaaaatgattttataaaaaggattccaaatcaatat
ataaaaaaattaaaaacaggttacaaaagatatttttaa
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