Tepiditoga spiralis: OSSY52_10640
Help
Entry
OSSY52_10640 CDS
T06810
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ocy
Tepiditoga spiralis
Pathway
ocy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ocy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OSSY52_10640 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocy03021
]
OSSY52_10640 (rpoA)
03400 DNA repair and recombination proteins [BR:
ocy03400
]
OSSY52_10640 (rpoA)
Enzymes [BR:
ocy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OSSY52_10640 (rpoA)
Transcription machinery [BR:
ocy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OSSY52_10640 (rpoA)
DNA repair and recombination proteins [BR:
ocy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OSSY52_10640 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
HHH_5
Spectrin_7
Motif
Other DBs
NCBI-ProteinID:
BBE30923
UniProt:
A0A7G1G7Q1
LinkDB
All DBs
Position
1168705..1169772
Genome browser
AA seq
355 aa
AA seq
DB search
MELYIKPETFEVVEERKDNEYNYAKFEMYPLEKGYAITMGNALRRVMLSTIPAFAIVGLR
VPGKLHEFDTIEGITEDILEISLNLKKVQIKATDSKLLEKNEEFELVINKTGIKGEPVDI
LAGDIQTPTGLEIANPEYKIATLNSDNNVEMYLYARPGKGFVSARDIERTEEQKDVEYIY
IDGAFSPVLKVNFLTENYRVGKVTDYDKLILEVWTKNNIEPLEALKRSTTILMDHFMFMS
KYWKDSTGEESQEPIQDMGTGLEASEALADESAEIPGVSREILETSIDNLDLTKRAKNCL
KRERINVIGELFKKTPEELMKIKNFGKKSLDEIRKELIDKFGLDYDKVFNERRSK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaattatatataaaaccagaaacatttgaagtggttgaagaaagaaaagataatgaa
tataattatgcaaaatttgaaatgtatccccttgaaaaaggatatgctattactatgggg
aatgcattaagaagagttatgctttcaacaatacctgcctttgctattgttggattaaga
gttccagggaaacttcatgaatttgatacaattgaaggaattacagaagatatacttgaa
atttctttaaatttaaaaaaagttcaaataaaagctacagattctaagcttcttgaaaag
aatgaagaatttgagttagtaataaataaaactggaataaaaggtgaaccggttgatatt
ttagcaggggatatacaaacaccaacgggacttgaaatagcaaatcctgaatataaaata
gctacattaaattctgataacaatgttgaaatgtatttgtatgcaagacctggtaaaggt
tttgtatctgcaagagatattgaaagaactgaagaacaaaaagatgtagaatatatatac
attgatggtgcatttagtccagtattaaaagttaactttttaactgaaaactatcgtgtt
ggaaaagttacagattatgataagttaatacttgaagtttggacaaaaaataatatagaa
cctctagaagcattaaaaagatcaacaacaatactaatggatcattttatgtttatgtct
aagtattggaaagattctaccggtgaagaaagccaagaacccatccaagatatgggtact
ggtttagaagcatcagaagctttagcagatgaaagtgctgaaattccaggtgtttcaaga
gaaattttagaaacatcaatagataatcttgaccttacaaaaagagcaaagaattgttta
aaaagagaaagaataaatgtaataggtgaacttttcaaaaagactccagaagaattaatg
aaaattaaaaattttggaaagaagtctttagatgaaataagaaaagaacttattgataaa
ttcggactcgactatgataaagtattcaatgaaaggaggagcaaataa
DBGET
integrated database retrieval system
