Tepiditoga spiralis: OSSY52_21170
Help
Entry
OSSY52_21170 CDS
T06810
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ocy
Tepiditoga spiralis
Pathway
ocy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSSY52_21170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocy03019
]
OSSY52_21170
03400 DNA repair and recombination proteins [BR:
ocy03400
]
OSSY52_21170
Enzymes [BR:
ocy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OSSY52_21170
Messenger RNA biogenesis [BR:
ocy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OSSY52_21170
DNA repair and recombination proteins [BR:
ocy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OSSY52_21170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Rio2_N
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
BBE31976
UniProt:
A0A7G1G942
LinkDB
All DBs
Position
2307790..2309718
Genome browser
AA seq
642 aa
AA seq
DB search
MIDRKKAEYILKSKFKIEKFYEEQWKTINYLLNNEKVLLIQKTGYGKSLCYQFPSIIFDG
VTIVFSPLKALMRDQIKSATNAGIPVETINSDRNETDNYLAIEKAKNGEIKILYISPERM
EDSNWLEIIKEIKISMIVIDEAHCISVWGHDFRPAYRRIIELVKLLPESIPVLALTATAT
KKVQNDIHTQIGGKSKIIRGDLLRENLVLNVVSVKNEHEKMVFIKQILNRVPGTGIIYTG
TTSNAELFSKWFKFNGINSVYYHSKLKSSDKYTIERKLINNTVKCVVATNSLGMGIDKSD
IRFIIHTQIPSSPIHYYQEIGRAGRDGKKAWIFLMYNEKDKKLQESFIESSKPSVTKYNK
VIKKLKEEPLKLSDLMKSFRIKEVQLKTILSDLIEQKIIRKNSKSYYEYIPNSNVFDEMA
IEKLRERKYLELNSMINYALTNKCRMNFLRNYLDDKTTEVCNNCDNDRKIKYAVKINDDE
NKKIFDFFDLLYPQIKVDTKNDILNNGVAFFKDSKKINYIIKNKEDFPYYMVLNLAKAFK
SKFDNEDFDMALYVPNEDEIYIKRFSAKLGKVLNIPVKYYLKLSKYGFECTRSYEFVGKK
ILIIDAVYKKNTINLIANLLKRLGAKKVIPLTIAIGEDETFE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgattgatagaaaaaaagcagaatatatattaaaatccaaatttaaaattgagaaattt
tatgaagaacaatggaaaacaattaattatttattaaataatgaaaaagtacttttaatt
caaaaaactggatatggaaaaagtttatgttatcaatttccttctattatatttgatgga
gttacaattgtattttcgccactaaaagccttaatgagagatcaaataaaaagtgctaca
aatgcaggtataccagttgaaacaataaatagtgataggaatgaaacagataattatctt
gcaatagaaaaagctaaaaatggtgaaataaaaatattatatatatctccagaacgtatg
gaagattcaaattggcttgaaataataaaagaaataaaaatttctatgattgtaatagat
gaagcacattgtatatcggtttggggacatgattttagaccagcttataggagaattatt
gaactagtaaaattgcttccagaatcaatacctgtattggctttaacagctacagcaact
aaaaaagtccaaaatgatattcatacacaaattggtggaaaatctaaaataataagagga
gatttgttaagagaaaatcttgttttaaatgttgtaagtgtaaaaaacgaacatgaaaaa
atggtgtttataaaacaaatattaaatagagttccaggaactggaataatttatactgga
acaacttcaaatgcagaactattttcaaaatggtttaagtttaatggaataaattctgta
tattatcattcaaaattaaaatcttctgataaatatacgatcgaaagaaagttaattaac
aatacagtaaaatgtgttgtggctacaaattcattggggatgggaatagataaatcagat
atacgatttataatacacactcaaataccttcttcaccaatacattactatcaagaaata
ggtagggcaggaagagatgggaaaaaagcttggatttttttaatgtacaatgaaaaagat
aaaaaattacaagaaagctttattgaaagttcaaaaccttctgtaacaaagtataacaaa
gtaataaaaaaattaaaagaagaacctttaaaactatctgatttgatgaaaagttttaga
ataaaagaggtacaattaaaaactatactctcagatttaatagaacaaaaaataattaga
aaaaattcaaaaagttattatgaatatattccaaattcaaatgtttttgatgaaatggcc
attgaaaaattaagagaaagaaagtatttagaattaaacagtatgattaattacgcttta
acaaataaatgcagaatgaattttctaagaaattatttagatgataaaacaacagaagta
tgcaataattgtgataatgatagaaaaataaagtatgcagttaaaataaatgatgatgaa
aataaaaaaatattcgatttttttgatttattgtatcctcaaataaaagttgatacaaaa
aatgatatcttaaataatggagtggctttttttaaagattcaaaaaaaataaattatata
ataaaaaataaagaagattttccttattatatggttttaaatttagccaaagcttttaaa
agcaagtttgataatgaagactttgatatggcattatatgttccaaatgaagatgaaata
tatataaaaagattttcagctaaactaggaaaagttttgaatataccagtaaaatattat
ttaaaactatcaaaatatggatttgaatgtactagatcttatgaatttgtgggtaaaaaa
attttaataatagatgctgtatataaaaaaaatactattaatttaattgctaatttatta
aaacgtttaggtgctaaaaaggtaattcctttaacaattgctataggggaggatgaaact
tttgaataa
DBGET
integrated database retrieval system
