Ochotona curzoniae (black-lipped pika): 121144915
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Entry
121144915 CDS
T11174
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121144915 (SHOC1)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Meiosis-specific proteins
Others
121144915 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
121144915
NCBI-ProteinID:
XP_040819486
LinkDB
All DBs
Position
Unknown
AA seq
1497 aa
AA seq
DB search
MFPALKYCAIDYEYENEARKRFYRDALMLRVPSSFYQDGNYLVGVTDTKYRRPWTRISTV
SVWGETDTVWDEWKAVFPVEDSIEIKTPTRMTTQVNCESEEIVPSSNPNSQPEEEENMFC
AHKDCFEVFTPVKYSECLSPQSKIEDLFIDEEFVFVDSLKNYRNQLPTVKTLLSRLKLYV
IKDPLDDFKQVFKDNNWSVESLSVEANMEVFTKEDFSGPAETFCKVELEDEDLDESLLFL
PAIESVISACDEQEVGISSLPDLKESLDIMPEKIQHVDENEQFQGDIIFNHGIEIEDKKY
SFTKIWTTQNENEPEYDEPGELELPLSQPHLSNQHSSVNSLCAGLQTVPSSPAYEISSLT
TEESAKKYSMVEPPERCPSSSDTLMLAVPHTIICEYNNQCSVKHFKNMLSIQEYFAADPG
KAECWEKASLTQNQTETLENPDMPLCHDPSDTEMEMLLPENTVQIESCLENESCSSPIIL
NNEKSTNVHFSPPQNSPPMAEVTEICFPDGFVSTQTPTKEETPKNDQELVDGIIQENENK
NLFELECMGPSVELSSSSRINKASCEHHKEWDKCLDPLSDFIMLRNKHMTCTSRTEVTNN
EEKEDKEECSLPLQEKSPIVCADKSPENLIPKWGVDNVIEIQASESQCQAYCLLEAAAAP
VLKKLACLSPLPVTNWKFATVIFDETRFFLKEQEKIINDAVHQGTNDGREMTFKYAAVLH
LLVTTRDVLLTCDVDTALGYLSNAKDVYRSIVGSYLDGIWRQLDIVQFTNDKKSEVNYRI
QELQCQILNWMQDQQQIKVLIIIRMDSDVEKHLLIKILSKIEGLTLTVYHSNEGKDFLES
SPLLNGTSSCVIIHNQYIGANFPWGDFSFVVEYNYVENSYWTTHCKKLNIPYLRLKVILP
DTVLQRSTSLDTFSGFPLEIQIPYVFFASDGLLNTPEILQLLESNYNILLVERGCSESLK
LFGSTEHYAVVTVDEHTAIVLQNLEELNYEKASDNIIMRLMALSFQYSYCWLILYKKETI
NSEYHLTEKTLHHLALIYAALVSSGLKSAELDVKLIIAPGVEETALIIRQIADYSLMTSK
REPHDWLNKSWLEISPSKEELYLLDFPSISPLVAQLMLNKGSSLHGLLLANLCQLQEALP
EVPEKVLKHFCSITSLFKINSSTTESPQISLPQEDRNQISDLTSQSLPSNSSDSTTEQYN
AFYQYSDPGARVLEDTDTTSTYNISHVELRKMSPILSSAGSYNQNNYWKDFSCRPDIIPN
NPCLINMEPRRAACRSFLNRNDSDSDVFSLGQTQVSCEDAVPPIDCQKGAAPYFTNYQKK
QIQEAKGSTNKEVFPPIFSLMGYQSPSHLNFKKNAREPQTHSFNLHYGLEQTTWNECCFQ
PDQPKYRLQESEDFTWQRPDAGIQRTSRGGFPSLPSLDFPHASDSNVNQKEFNNISLYQR
TGEYLGQKRHLESSSDSGDKEALTGFMYPQLAQFKKRRLTYEKVPGRADGQTRLRFF
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgtttccagcactcaaatattgtgcaatagactatgaatatgagaatgaagctagaaag
agattttacagagatgctttaatgctgcgagtgccttcaagtttctatcaagatggaaat
tatcttgtgggagtcactgacactaaatataggaggccgtggacaagaatctcaaccgtt
tcggtttggggagagacagacacagtgtgggatgaatggaaagcagtgttccctgtggag
gattccatcgagataaaaacacctacaagaatgacgactcaagttaattgtgaatctgaa
gaaattgttccaagttcaaatccaaactcacagcctgaggaagaagaaaacatgttttgc
gcccacaaggactgctttgaggtcttcacacctgtcaagtattcagaatgtttgtcacct
cagtccaagattgaagatttatttattgatgaagaattcgtttttgtagatagtttgaag
aactatagaaatcaactgccaactgtgaaaactctcttgagtagactaaagctgtatgtc
ataaaggatccccttgacgatttcaaacaggtcttcaaagacaataattggtcagtggaa
tctttatcagttgaagcaaatatggaagtttttacaaaagaagatttttctgggcctgca
gagaccttttgtaaagtggaactagaagatgaagatttagatgagtcattgctttttctt
cctgccattgaatctgtaatatctgcatgtgatgaacaagaagttggtatttcatcactg
ccagacctgaaggagtcattagacataatgccagaaaaaatacagcatgtagatgaaaat
gaacagttccaaggagacattattttcaaccatggaattgaaattgaggataagaagtac
agtttcacaaagatttggaccactcaaaatgagaatgagccagagtatgatgaaccagga
gagttagaacttcctctaagtcagccacacctttcaaatcaacattcttcagtgaattca
ttatgtgcaggccttcagacagttccgtcatctcctgcttatgaaattagctctcttact
accgaagaatcagctaagaaatactcaatggtcgagccaccagaaagatgcccaagctct
tcagacacactgatgcttgctgttcctcacactatcatttgtgagtacaataatcagtgt
tcagttaaacactttaaaaatatgctttctattcaagagtactttgcagctgatcctgga
aaggcagagtgctgggagaaagcaagtctgactcaaaaccagacagaaactttggaaaac
ccagacatgcctttatgtcatgatcccagtgacaccgaaatggagatgcttttgccagaa
aacactgttcaaatagaatcatgtctagagaatgaaagttgttcatcacctattatactt
aataatgagaaatctacaaatgttcatttttcacctccacaaaatagtccacctatggca
gaagtaacagaaatatgttttcctgatggttttgtctctactcaaacaccaacaaaagaa
gaaacaccaaagaatgatcaagagctagttgatggaataatccaggaaaatgaaaataag
aatctctttgaacttgagtgcatgggaccatctgttgaattatcttcctcttcaagaatt
aacaaagcatcttgtgagcaccataaagagtgggataaatgtttggaccctctaagcgat
tttattatgctgagaaataaacatatgacttgtacatcaagaactgaagtcacaaacaat
gaagaaaaagaggataaagaagaatgttcattgcctcttcaggaaaaaagtcctattgtc
tgtgctgataaatccccagagaacctaattccaaaatggggagtagataatgtcattgaa
attcaagcatcagagagtcagtgccaagcatactgtcttctagaagcagcagctgctcct
gtcttgaaaaagcttgcgtgcctctctcctctccctgtcactaattggaaatttgccact
gttatttttgatgaaacaaggttcttcttaaaggaacaagaaaaaataataaatgatgct
gttcaccaaggtacaaatgatggaagagaaatgacgttcaagtatgctgctgtcttgcac
cttctggtaactaccagggatgtccttctaacgtgcgatgtagacacagcattaggatat
ttgtcaaatgcaaaagatgtctacagaagtattgtgggctcttatttggatggcatttgg
agacagctggacattgtacagtttactaatgacaaaaagtctgaagttaactacagaata
caggaattgcaatgtcagattttaaattggatgcaagatcaacagcaaattaaggtgctg
attataataagaatggattcagatgttgaaaaacatttactcattaaaatcctatccaaa
atagaaggtttaacacttactgtctatcactcgaatgaaggaaaagattttctggaatct
agtcctcttttaaatggtacaagttcctgtgtaattatacacaatcaatatattggcgcc
aacttcccttggggagatttctcatttgtggtggaatacaattatgtagaaaattcttat
tggaccacacactgcaaaaaattgaatatcccttacctacgcttaaaagtgattcttcca
gacacagttttacagagaagtacttcattggatacgtttagtggctttcctttggaaatt
cagattccatatgtgttttttgcatctgatggacttcttaatactccagaaattcttcag
ttgctagaatccaattacaatatcctattggtggagagaggctgcagtgagtcattgaag
ctctttggaagcacagagcattatgcggtggtgacagtcgatgagcacactgccatcgtt
ttgcagaacctagaagaactgaattatgagaaggcatcagacaatatcattatgagactc
atggctttgtcatttcaatacagctattgttggctaattttatataaaaaagaaacaata
aattctgagtaccatcttacagaaaagacacttcatcatctagcactgatatatgcagct
ttggtttcatccgggctaaaatctgcagaactggatgtaaagcttataattgccccagga
gtagaagaaactgcattgataattcgacaaattgctgactacagtttaatgacctccaag
agagagcctcatgattggttgaataaatcctggcttgaaatttcaccatctaaggaagaa
ctgtatttacttgatttccccagtattagcccactggtggctcagctcatgttaaataaa
ggctcttccctgcatgggctgttattagcgaatctgtgtcagcttcaggaagctctccct
gaagttccagaaaaagtgttaaagcatttttgcagcatcacttccttgttcaagattaat
tcctccacaacagaatcacctcaaatttcattacctcaggaagaccggaatcagatcagt
gaccttacttctcagagtttaccttccaactcttcagactctaccactgaacaatacaat
gccttttaccaatattcagatccaggggccagagtgctggaagacacagacaccacttca
acttataatatttcccacgtggagttaagaaaaatgtctcccattttatcatctgcaggt
tcttataatcagaacaactactggaaagactttagttgtagacctgacataatcccaaat
aatccttgtctaattaacatggaaccaaggagagcagcttgtaggtcatttctaaaccgg
aatgattcagattcagatgtcttttctttgggtcaaacgcaagtcagttgtgaagatgca
gtgccaccaattgactgtcagaagggagctgccccttattttacaaattatcagaaaaag
caaatacaggaagccaaaggatccacaaacaaggaagtatttccccccatcttttcacta
atgggctatcagtctccttctcacttgaactttaagaaaaatgcacgggaaccacagact
cactcattcaacttgcactatggcttggaacagactacatggaatgagtgctgctttcag
ccagatcaaccgaaatatcgcttgcaggagtcagaagacttcacatggcaaaggccagat
gctgggattcaaaggacttccaggggaggcttcccgtcccttcccagtttagattttccc
catgcttctgattctaatgtcaatcaaaaagaattcaataacatttctttataccaaaga
actggagaatatttaggtcagaaaagacatcttgaaagttcatctgactcaggagacaag
gaagcactgacaggtttcatgtacccacaattagcacagttcaagaagcgacgtctcacg
tatgaaaaagtccctgggagagctgatggacaaacccggctgagatttttttga
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integrated database retrieval system
