Ochotona curzoniae (black-lipped pika): 121145034
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Entry
121145034 CDS
T11174
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz02010
ABC transporters
ocz04148
Efferocytosis
ocz04975
Fat digestion and absorption
ocz04979
Cholesterol metabolism
ocz05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121145034 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121145034 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
121145034 (ABCA1)
04979 Cholesterol metabolism
121145034 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
121145034 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocz02000
]
121145034 (ABCA1)
Transporters [BR:
ocz02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
121145034 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
121145034
NCBI-ProteinID:
XP_040819625
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSQKDT
SLKDIHKVLRTLQQIKNSNSSLKLQDFLSDNETFSGFLHHNLSLPKPFVDNMLKANVSLH
KVFLQGYQLRLTNLCNGSKLEEVIPLDDQEVSELCGLPREKLDAAERELRSNMDILKPIV
RELNSTSPFPTKQLAEATKVLLDSLGALAQELFSMRSWSDMRQEVMFLTNANGSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDANTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLIGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELS
PQIWTFMENSQEMDLVRTLLDSRGNEPFWEQKLDGLGWSAQDIVMFLAKHPEDVKSANGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPIATEVRLINKSMELLDERKFWAGVVFTG
ITPDSVELPPHVKYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFALKIFTS
LLSPVAFGFGCEYFALFEEQGVGVQWDNFFKSPVEEDGFNLTTSVSMMLFDAFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESNEKKHPGSSQKGISEICMEEEPTHLKLGVS
IQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRAFGDKQSCLRPFTEDDAMDPNDSDLDPESRETDLLSGMDGKGSYQVK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPEDTGTQELLKALTKDPGFGTRCMEGNPIPDAPCLAGEEEWVTAQ
VPQTIVDLFQNGNWTMENPSPACQCSSDKIKKMLPVCPPGAGGLPPPQRKQNTADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNSQALPPSREVNEAIKQVKK
HLRLAKDSSADRFLNSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQK
GENPTRYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVVIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVNAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELTKI
YRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSN
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEK
YAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKQLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttggcctcagttgaggttgttgctatggaaaaacctcactttccgaagaaga
caaacatgtcagctcttgctggaagtggcctggcctctgtttatcttcttgatcctgatt
tctgtccggctgagctacccgccctatgaacaacatgaatgccactttccaaataaagcc
atgccctccgcaggaacacttccttgggttcaggggattatctgtaatgccaacaatcct
tgttttcgttacccaactcctggtgaggctcctggagtggttggaaactttaacaaatcc
attgtgtctcgcctcttctcagatgcccggaggcttcttctgtatagccagaaagacacc
agcctgaaggacatacacaaagttttgagaacattacagcagatcaagaattccaactca
agtttgaagcttcaggattttctgtcagacaatgaaaccttttctggcttcctgcatcac
aacctttctctccctaagccgtttgtggacaacatgctgaaggctaatgtcagtctccac
aaggtttttctgcaaggctaccagctacgtttgaccaatctgtgcaatggatcaaaatta
gaagaggtgattccacttgacgaccaagaagtttctgagctttgtggtctaccgagggag
aaactggatgcagcagagcgagagcttcgttccaacatggacatcctgaagcccattgtg
agagaactaaactccacatctcccttcccaaccaagcagctggctgaagccacaaaagtt
ttgctggatagtcttggggctttggcccaagagctcttcagcatgaggagctggagcgac
atgcgacaggaggtgatgtttctgaccaacgccaatggctccagctcctccactcagata
taccaggctgtgtcgcggattgtctgtggccatccggagggcgggggactgaagatcaag
tctctgaactggtatgaagacaacaattacaaagccctctttggaggcaacggcactgag
gaagatgctaacaccttctatgacaactccaccacgccttattgcaatgatctgatgaag
aatttagagtccagtcctctttctcgtatcatctggaaagctctcaagcctctgctcatt
ggaaagatcctgtatacacctgacactccagccacgagacaggttatggctgaggtgaac
aagacgttccaggagctggctgtgttccatgatctggaaggcatgtgggaagagctcagc
ccccaaatctggaccttcatggagaacagccaagaaatggaccttgtccggacactgctg
gatagcaggggcaatgaacccttttgggaacagaagttggatggcttaggttggtcagcc
caagacattgtgatgtttctggccaagcacccagaggatgtcaagtcggctaatggctct
gtatatacctggagagaagctttcaacgagacgaaccaggccatccagaccatttctcgc
ttcatggagtgtgtcaatctcaacaaactggaacccatagcaactgaagtccggctcatt
aacaagtccatggagctactggatgagcgaaagttctgggccggagttgtcttcactgga
attactccggacagtgttgagctgccccctcacgtcaagtacaagatccgaatggacatt
gacaatgtggagaggactaataaaatcaaggatgcgtactgggaccctggtcctcgggct
gatccctttgaggatatgcggtatgtctggggaggcttcgcgtacttgcaggatgtggtg
gagcaagcgatcatcagggtgctgaccggcactgagaagaaaactggtgtttatgtgcaa
cagatgccctatccctgctatgtagatgacatcttcctgcgggtgatgagccggtcgatg
cctcttttcatgacgttggcctggatttattctgtggctgtcatcattaagggcattgtg
tatgagaaggaggcacggctgaaggagaccatgcggatcatgggcctggacaatggcatc
ctctggtttagctggttcatcagcagcctcatccctctgcttgtgagtgctggcctgctg
gtggtcatcctgaagttaggaaacctgctgccctacagtgatcccagcgtggtgtttgtc
ttcctgtctgtgtttgctgtggtgaccatcatgcagtgcttcttgatcagtacgctcttc
tccagagccaacctggccgcagcctgtgggggcatcatctacttcacgctgtacctgccc
tatgtcctctgtgtggcctggcaggactacgtgggcttcgcactcaagatcttcactagc
ctgctgtctcctgtggcttttgggtttggttgtgaatactttgccctttttgaggaacaa
ggtgttggggtgcagtgggataacttctttaagagccctgtggaggaagatggtttcaat
ctcaccacttcagtctccatgatgctgtttgatgccttcctgtacggggtgatgacgtgg
tacatcgaggctgtctttccaggccagtatggcattcccagaccctggtatttcccatgc
accaagtcctattggttcggtgaggaaagcaatgagaagaagcaccccggttcaagccag
aagggaatatcagaaatttgtatggaagaagagcccacccacttgaagttgggtgtgtcc
attcagaacctggtgaaggtttaccgggatggcatgaaagtggctgttgatggcttggca
ctgaatttctatgagggccagatcacctccttcctgggacacaatggagcagggaagacg
accaccatgtccatcctgactggactcttccctcccacctcgggcacggcctacatcctg
gggaaggacatccgctcggagatgagcaccattcggcagaatctgggtgtctgtccccag
cacaatgtgctgtttgacatgctgactgtggaagagcatatctggttctatgcccgcctc
aaagggctctctgagaagcacgtgaaagcagagatggaacagatggcgctggatgttggc
ttgccacccagcaagctgaagagcaaaacaagtcagttgtcaggtggaatgcagaggaaa
ctgtctgtggcattggcctttgtcggggggtccaaggttgtcattctggatgagcccaca
gctggtgtggacccttattcccgcaggggaatatgggagctgctgctgaaatacagacaa
ggccgcaccattattctctctacacaccacatggatgaagcggacatcctgggggacagg
atcgccatcatttcccatgggaagctgtgctgtgtaggctcctccctgttcctgaagaac
cagctgggaacaggctactacctgacgctggtgaagaaagatgtggaatcctctctgagt
tcctgcagaaacagcagcagcactgtgtcatatctgaaaaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtc
tctgctatctccaacctcatcaggaagcatgtgtctgaagctcggctggtagaagacatt
gggcatgagctgacctatgtgctgccatatgaagctgctaaggaaggggcttttgtggaa
ctcttccatgagattgatgaccggctctcagacctgggaatctctagttatggcatctca
gaaaccaccttggaagaaatattcctcaaagtggctgaagagagtggagtggacgctgag
acctcagatggtaccttgccagcaagacggaacagacgggcctttggagataagcagagc
tgtcttcgccctttcactgaagacgatgccatggatccaaatgattccgacttagaccca
gaatccagagagacggacttgctcagcgggatggacggcaaaggctcctaccaggtgaag
ggctggaagctcacccagcagcagtttgtggcccttttgtggaaacggctgctgattgcc
agacggagtcgaaaaggattctttgctcagattgtcctgccagctgtgttcgtctgcatt
gccttggtgttcagtctgattgtaccaccgtttggcaagtatccgagcctggagcttcaa
ccctggatgtacaatgaacagtacacatttgtcagtaatgacgctccagaggacacgggc
acccaggaactgttgaaggctctcaccaaagaccctggctttgggacccggtgtatggaa
ggaaacccaatcccagacgcaccctgcttggcaggggaggaagagtgggtcactgcccaa
gttccccagaccattgtagatctcttccaaaatggaaactggaccatggagaatccctca
cccgcctgccagtgtagcagtgacaaaatcaagaagatgctgcctgtgtgtcctcccggg
gcaggggggctgcctcctccacaaagaaaacagaacactgcagacatccttcagaacctt
acaggaaggaacatctcggattacctggtgaagacgtatgtgcagatcatagccaaaagt
ttgaaaaacaagatctgggtgaatgagtttaggtatggtggcttttctctgggtgtcagc
aactcccaggcactccctccaagccgagaagttaatgaagccattaaacaagtgaagaaa
catttgaggctggccaaggacagctctgcagatcgatttctcaacagcttggggaggttc
atgactggactggacaccaaaaataatgtcaaggtgtggtttaataacaaaggctggcat
gccattagctctttcctgaatgtcatcaacaatgccattctccgggccaacctgcagaag
ggagagaatcctacccgttatggaattactgctttcaatcaccccctaaatcttaccaag
cagcagctctcagaagtggctctgatgaccacatcagtggatgtcctcgtgtccatctgt
gtcatctttgcaatgtccttcgtcccggccagctttgttgtgttcctcatccaggagcgg
gttagcaaagcaaaacacctgcagttcatcagtggagtgaagcctgtcatctactggctg
tccaattttgtctgggatatgtgcaattatgtggtccctgcgacattggtcgtcatcatc
ttcatctgcttccagcagaagtcctatgtgtcctccaccaacctgcccgttctagccctt
ctactgttgctctatgggtggtcaatcacacctctcatgtacccggcttccttcgtgttt
aagatccccagcacagcctacgtggtactcaccagtgtgaaccttttcattggcatcaac
ggcagtgtggccacttttgttctggagctcttcaccaacaataagctgaataacatcaat
gatatcctgaagtctgtgtttttgatattcccacatttttgcctgggacgagggctcatt
gacatggtgaaaaaccaggccatggctgatgccctggaaaggtttggggagaatcgcttt
gtgtcaccactctcctgggacttggtgggacgcaacctcttcgctatggctgtggaaggg
gtggtgtttttcctcattaccgttctcatccagtacagattcttcatcagacccagacct
gtaaatgcaaagcttcctcctctaaatgatgaggatgaagatgtgaggcgagaaagacaa
agaattctagatggtggaggacaaaatgacatcttggaaatcaaagagctgacaaagatc
tatagaaggaagaggaagcctgctgtggacaggatttgtgttggcattcctcctggcgag
tgctttgggcttctgggtgtaaatggagctgggaaatcttccactttcaagatgctaact
ggagacaccactgtcaccagaggagatgctttccttaacaaaaatagtatcttatcaaat
atccatgaagtacatcagaacatgggctactgccctcagtttgatgccataacggagttg
ctgactggaagagagcatgtggagttctttgccctcttgagaggagtcccagagaaagaa
gttggcaaggttggagagtgggcaattcggaagctgggccttgtgaaatatggagaaaaa
tatgccggtaactatagcgggggcaacaaacgcaagctctcaacagccatggctttgatt
ggtgggcctcccgtggtgttcctggatgaaccaaccacaggcatggatcctaaagcccgg
cgattcctgtggaattgtgccctaagtgttgtcaaggagggacgatcagtggtgcttaca
tctcatagtatggaagaatgtgaagctctgtgcactaggatggcgattatggtcaatggg
aggttcaggtgtcttggcagtgtccaacatctgaaaaataggtttggagatggttatacg
atagttgtacggatagcaggatccaaccctgacctgaaacctgtccaagagttctttgga
cttgcctttcctgggagtgtattaaaagagaagcaccggaacatgttacagtaccagctt
ccatcttcattatcttctctagccaggatattcagcatcctctcccagagcaaaaagcaa
ctccacatagaggactactctgtttctcagacaacgcttgaccaagtatttgtgaacttt
gccaaggaccaaagtgatgatgaccacttaaaggacctgtcattacacaaaaaccagact
gtagtagatgttgcggttctcacatcttttctgcaggatgagaaagtgaaagaaagttat
gtatga
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integrated database retrieval system
