Ochotona curzoniae (black-lipped pika): 121145099
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Entry
121145099 CDS
T11174
Symbol
NUP214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
ocz05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121145099 (NUP214)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121145099 (NUP214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121145099 (NUP214)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121145099 (NUP214)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
121145099
NCBI-ProteinID:
XP_040819772
LinkDB
All DBs
Position
Unknown
AA seq
2063 aa
AA seq
DB search
MGDEMDAVIPEREMKDFQFRALKKVRVFDSPEELPKERSHLLAVSNKYGLLFAGGATGLQ
VFPTKHLLIQNKPGDDPNKVVDKVQSLPVPMKFPVHHLALSCDDLTLSVCMMSSEHGSII
AFFDVRTFSNEAKQQKRPFTYHKLQKDAGGMVMDMKWNPTVPSMVAVCLADGSIAVLQVT
EAVKVCAALPPTAGVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYEADHP
VRVLDVLWIGTYVFTIVYAAADGTLETSPDVVVALLPKKEDKHPEVFVNFMEPCYGSCTE
RQHRYFLSYVEEWDLVLAASAASTEVSILARQSDQVNWELWVLEDSSRAELPVTDKSDDS
LPVGVAVDYTNQVEITINDEKTLPPAPVLLLLSTDGVLCPFYMINQNPGVKSLLKVPERL
PLEGERQPKSSGSTPTTPTSSQTPPKVETSALASPASAPAAAPAAPTATFHVPPAGGAPA
VFSFGSASLKLSAPGAGEAPDNPTLGSGVPAFSFAPPKASLAPTPAASPMAAPAVSFSFG
SSGFKPTLESTPMPSVSAPNAGIKSFPASMSGAKANLSEKFTAMAASAPASSSLSSPSVL
PFSSASKPAASGPLGPLAPLSASTAGLSLKPSSSGSPSGRSTQGSPTPAPTLVQKTPRIT
PPVAKSGPTQVKPLQPPPAEKQGHSWKDSDPVTAGIGEEISHFQKELEELKARTSTCCFQ
VGTAEELKMLRTESDDLHTFLLEIKETTESLHGDISTLKTTLLEGFAGVEEARGQNERNH
DSGYRHLLHKRPLDPKSEAQLQEIRRLHQYVRFAVQDVNDVLDLEWDRHLEQKKKQKRLL
VPERETLFNTLANNREIINQQRKRLNQLVDSLQHLRLYNQTSQWSLPCVAASPDSPQSFD
SDLESLRNALLKTAIESRTKPLPRVPAKLSPVKLAQLRNFLSKRKTPPVRSTAPANLSRS
AFLSQRYYEDLDEASSTSSVSQSLESEDARAPCKEEEAVVQAPRHAPVVRTASVQPSLLP
QAIPFGKPPPSPSASPGVLSPALLTSAGKIVPQGADSTLLATKTVKHGAPSPSHPVSASQ
AAAAAAMRRQMASQMPAVSTLTESTLKNVPQVVNVQELKSNPPASSPAVGSSVPHSAGRA
PHPGLTPVAANQAKQGSLISSLKPPGPTPAGSSQVSSGGKAAGPGTAKTETAVTSSPSAG
GQFSKSFSFAPAGTGFNFGIITPAPSSSFTAAQGATPATKETGQPDTFSFSGGGKPFYEA
IPENSSSASSTPGAASSSAGESAPAGNSRPGAASGTVLPATSSKLETAPAKLGELLCPRP
SAGETLGSFSGLRVGPADDAAEPASKASSVPSGFTLSGPAAPGKHVGPPVSAPATAPTAA
LPPAASAGSGSSSGAVPGSLSLPSPGTSGAIGFGGISFGSSKASFSFGSSQTSSTVPLSA
PASTTTTSSLPAAFPTLSFGSLLSSAGSSLPASSSRGAEEAPTAVAPPERTSCNEGSAST
ALPPGQQPSAHLPQAPQPTPDSGNKEPALVQPAVSSPSSSASHMAPAAEAAAATTAVPEV
KTEVAPPTFSFSVPEQTATAVSAIPGTPTSSSTVPSSAPGPATETAVFATVTSGPSVFTQ
PPAASSSSAFSQLASSTATTPSAAPVFGQVAASTAPGLFGQQTSSVTSTATTTPQASSSA
FGSPAFGASAPAVFGQSTFGQAPAFGQATSSPTSSFSFSQPGFSSVPAFGQATSSAPTPT
SASVFGASSNTSSSSSFSFGQSSANAGRGLFGQSPTPAFGQSPGFGQAGSVFGSTSAAST
AATPSGFSFCQASGFGTSSTGSVFGQAPSTGGTVFGQQSSSSSGSLFGSGSATRGGGFFS
GLGGKPSQDAANKNPFSSTSGGFGSTATPNTSNLFGNSGAKAFGGFASSSFGEHKPAGTF
SSGGGSVASQGFGFSTPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGST
GGKVFGEGTAAASAGGFGFGSSSNTASFGTLASQNAPTFGSLSQQTPGFGTQSGGFSGFG
SGSGGFSFGSSSSSVQGFGGWRS
NT seq
6192 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgagatggatgccgtgatccccgagcgggagatgaaggatttccaattccga
gcgctgaagaaggtgagagtgttcgactcgccggaggagctgcccaaggagcgctcccac
ctgctcgctgtgtccaacaagtacgggctgctctttgccgggggcgccactggcctgcag
gtgttccctaccaaacacctgctcattcagaacaagccaggagatgatcccaataaagta
gttgataaggtgcagagcctgccggtccccatgaagttcccagtgcatcacttggcgctg
agctgtgatgacctcaccctctccgtgtgtatgatgtccagcgagcatggttccatcatt
gctttctttgatgttcgcacgttctcaaacgaggcaaagcagcagaagcgcccgttcacc
taccacaagctccagaaagacgcaggcgggatggtgatggatatgaagtggaaccccacg
gtgccctccatggtggccgtctgtctggccgatggcagcatcgctgtcctccaagtcaca
gaggctgtcaaagtgtgtgcggcgcttcctcccacggccggtgtaacgtctgtgtgctgg
agccccaaaggaaaacagctggcagtgggcaaacagaacggaactgtggtgcagtacctc
cctactttgcaggaaaaaaaagtcattccatgtcctccgttttatgaggcagatcatcct
gtccgagttctggatgtgctgtggatcggcacctacgtcttcaccatcgtgtacgctgct
gccgacggcaccttggaaacctctccagatgtggtcgtagcgctgctgccgaaaaaagaa
gacaagcaccccgaggtgtttgtgaacttcatggagccctgctacggcagctgcacggag
aggcagcatcgttacttcctcagctacgtggaggagtgggacttggtgttggcagcatct
gcagcctcaacggaagttagcatccttgctcgacagagtgatcaggttaactgggaattg
tgggtgctggaggactccagtcgagctgaactgcccgtaacagacaagagtgatgactct
ctgcccgtgggggtcgccgtagactataccaaccaagtggaaattaccatcaatgatgag
aagactcttcctcctgcccccgttctcctgttgctgtcgacagatggtgtgctctgtccg
ttttacatgatcaatcaaaatcctggggtcaagtccctcctcaaggtgccagagaggctg
ccgttggaaggagagcggcagcccaagtcatcaggaagcactcctactactcccacctcc
tcccaaaccccaccaaaagttgaaacctcagcactggcatcccctgcttctgctccggct
gcggcacctgctgctcccaccgccaccttccatgtgcctcctgctgggggagcccctgct
gtgttctccttcggctctgcctccttaaaattatccgcccccggggccggggaggctcct
gacaatcccaccctgggttcgggcgttcctgccttctctttcgcccctcccaaagcctcg
cttgcacccacccctgcagcatcacccatggctgcacctgctgtttcattttcctttgga
tcctcgggttttaagcctaccctggagagtacacctatgccgagtgtgtctgctccaaat
gcaggaatcaagtccttcccggcctccatgtcgggggccaaggccaaccttagtgaaaaa
tttactgccatggctgcctcggcccctgcgagtagctccctgagctccccctccgtgctg
ccgttctcatccgcctcgaagccagcagcttcggggcctcttggccccctggcacctctc
tcagcatccacggctggcctgtccttgaagccttccagttctggctccccctcagggcgg
tccactcagggaagtcccactccggcgcccaccctggtacagaagacacccaggataacc
cctcctgtggccaagtcgggccccacccaggtgaagccgcttcagcctcctcctgcagaa
aagcagggtcattcctggaaagactcagatcctgtgacggctgggatcggagaggagatc
tcacattttcagaaggagctagaagaattgaaagcccgaacttccacgtgctgtttccag
gtgggcacggcggaggagctgaagatgctgagaacggaatcggatgacttgcacaccttt
ctcctggagattaaggagaccacagagtctcttcatggagacataagcaccctgaaaaca
actctccttgagggttttgccggtgttgaagaagccagaggacaaaatgaaaggaaccat
gattctggctatcgccatctgctccataaaagacccctggatcccaagagtgaagcccag
ctccaggaaatccggcgccttcatcagtacgtgagatttgctgtgcaagatgtgaacgat
gtgcttgacctcgagtgggatcggcacttggaacaaaagaagaaacagaagcgcctgctt
gtgcccgagcgagagacactgttcaacacgctggccaacaaccgcgagatcatcaaccag
cagaggaagaggctgaatcagctggtggacagtctgcagcatctccgtctttacaaccag
acgtcccagtggagcctgccctgcgtggccgcttccccggacagccctcagagttttgac
agtgacttggagagtctgcgcaatgctttgctgaagacagccatagaatcccgcaccaaa
cccttgcccagggtgccagctaaactgtctcctgtgaaactggcacaactaagaaacttc
ttatccaagaggaagaccccacctgttagatctactgctccagccaacctgtctcgttca
gctttcctatctcaaagatactatgaagacttggatgaagctagctcgacttcatctgtc
tcgcagtctctggagagtgaagatgcccgggccccttgtaaagaagaggaggcagtggtc
caggccccgcggcatgcccccgtggtccgcactgcctctgtccagcccagtctcttgccc
caggccataccttttggtaaacctcctcctagccccagtgcttcacctggcgtattatcc
cctgcactgttgacatctgctggcaaaatagttcctcaaggggctgacagcacactgctt
gccacaaaaaccgtgaaacatggcgccccgagtccttcgcacccggtctcggcatcgcag
gcggcagctgctgcagccatgagacgacagatggccagtcagatgccagctgttagtact
ttgactgaatcaaccttaaagaacgtcccccaggtggtgaatgtgcaggagttgaagagc
aaccctccagcctcctccccagccgtcggctcctcggtgccgcactctgccggcagagca
cctcaccccggcttaaccccagtggctgccaaccaggccaagcaggggtctctgatcagt
tccctcaagccacctgggcccacaccagcggggtccagtcaggtgtcatctgggggtaaa
gctgcagggccggggacagccaagacagaaaccgctgtgacttccagcccgtctgctggt
ggacagttcagcaagtctttctcgtttgctccagcagggactggctttaattttgggata
attacaccagcaccgtcgtctagcttcaccgctgcacaaggagcaacacctgccaccaaa
gagacaggccagccggacacattttcttttagcggcggaggcaaacctttttatgaagcc
attcctgaaaattcttcctcagcatccagcacccctggggctgccagttcctctgcgggg
gagtctgctcctgctgggaacagcaggcctggagcagcttctggaactgttcttcctgcc
acctccagcaagctggaaaccgctccggccaagctgggagagcttctgtgtccgaggcct
tcggctggggagactctggggagcttctccgggctgcgggtgggcccggcagacgacgca
gcagaaccagccagtaaggcttccagcgtgccctcgggcttcactctgagtggccctgca
gcccccgggaagcacgtgggacccccggtgagcgcccctgcgactgctcccacggcagca
ctgccgccagctgcgagcgcaggctctggcagttcctcgggtgctgtgcccggcagcctc
tccctgcccagcccaggaacctcaggggccatcggtttcggtgggatttctttcggtagt
agcaaagccagcttttcctttggaagctcacagactagtagtacagtgcccctgtctgcc
cccgcgtccaccacaaccacctcatccctcccagcggcattcccgacactgtcgtttggg
agtctcctgagttcagctggctcctccctgcccgcatcttccagcagaggtgcggaggag
gccccgacggctgtggctccaccggagaggacaagctgtaatgagggctcagcatccaca
gccctgcctccagggcagcagccgtcagcccatcttccgcaggctcctcagccgacgccg
gactctgggaacaaagaacctgctcttgtccaaccggcagtcagcagccccagctccagt
gccagccacatggcccctgctgcagaggctgctgcagcaaccactgcggtccctgaagtc
aagacagaggtggcaccccccactttttccttctcggtccctgagcagactgccaccgca
gtcagcgcgatcccaggtacccccacctcctccagcactgtccccagcagtgctccaggc
ccagctacagagacagctgtgtttgcgacagtcacttctggcccttcagtctttactcag
ccacctgctgccagttctagttcagcgttcagccagctcgccagcagcacagccactacg
ccctcggcagcacccgtgtttggacaggtggcggccagcacggccccgggcctgtttggg
cagcagacaagcagtgtgaccagcacggcgaccactacgccccaggccagcagctcggcc
tttggcagcccagcgttcggcgcctcggccccagcggtctttggacagtcaacatttgga
caggccccagccttcggccaggccacgagcagccccaccagcagcttctccttcagtcag
cctggctttagctctgtacccgcctttggccaggccacatcctcggcccccacccccacc
agtgccagtgtcttcggcgcctcctccaataccagtagctccagttccttttcgtttgga
cagtcttctgccaacgcaggccgtgggctgtttggacagagccccactcccgcttttgga
caaagtcctggctttgggcaggctggctctgtgttcggtagcacctcggccgcaagcacc
gcagccacaccctcggggtttagcttctgtcaagcttcaggttttgggactagcagtact
ggttctgtgtttggtcaggcacccagtactggtggaacagtgtttggccagcagtcctcg
tcttccagcggcagcctgtttggctctggaagtgctactagagggggcggtttcttcagt
ggccttggaggcaaacccagccaggacgcagccaacaaaaacccattcagctctaccagc
gggggcttcggatctacagccaccccaaatacctcgaacctgtttggcaacagtggggcc
aaagcgtttggaggcttcgcgagctcgtcgtttggtgagcataagccggctggcaccttc
agctcgggcggaggcagcgtggcatcccaaggcttcgggttttctactccgaacaaaaca
ggtggcttcggtgctgctccagtgtttggcagccctcctacttttgggggatcccctggg
tttggaggggtgccagcattcggttcagccccagcctttacaagccctctgggctcgacg
ggaggcaaagtgttcggagagggcactgcggccgccagcgcaggaggattcgggtttggg
agcagcagcaacacggcctccttcgggacgctggcgagtcagaacgctcccaccttcggg
tcactgtcgcagcagacccctggctttgggacccagagtggcggcttctccggcttcggc
tccggctcaggaggattcagctttggctcatccagctcgtccgtccagggctttggtggc
tggaggagctag
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integrated database retrieval system
