Ochotona curzoniae (black-lipped pika): 121145305
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Entry
121145305 CDS
T11174
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocz04040
]
121145305
Ion channels [BR:
ocz04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121145305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
YVC1_C
HEAT_HEATR1
Motif
Other DBs
NCBI-GeneID:
121145305
NCBI-ProteinID:
XP_040819969
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MDPLTPQPNWTEIVNKKLKFPPLLLGAIQEGRLGLVQQLLESGAEAAGGGPGGPLRNVEE
SEDRSWREALNLAIRLGHEAITDVLLANVKFDFRQIHEALLVAVDTNQPAVVRRLLARLE
REKGRKVDTRSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQLLMDQGHTIARPHP
VSCACLECSNARRYDLLKFSLSRINTYRGIASRAHLSLASEDAMLAAFQLSRELRRLARK
EPEFKPEYIALESLCQDYGFELLGMCRNQSEVTAVLNDLGEDSDAEPEAEGLGQAFEEGI
PNLARLRLAVNYNQKRFVAHPICQQVLSSIWCGNLAGWRGSTTIWKLFVAFLIFLTMPFL
CLGYWLAPKSRLGRLLKIPVLKFLLHSASYLWFLIFLLGESLVMETQLSTFRGRSQSVWE
TSLHMIWVAGFLWFECKEVWIEGLRSYLLDWWNFLDVVILSLYLAAFALRLLLAGLAYLH
CREASDGAACRYFTSAERDEWRTEDPQFLAEVLFAVTSMLSFTRLAYILPAHESLGTLQI
SIGRMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETERLGNFNETFQFLFWTMFGMEEH
SVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKL
YLSYFREGLTLPVPFNILPSPKAIFYLLRRILQFICCCRSGCKAKKPEYPPIPSFANPGA
GPGPAEGERGSYRLRVIKALVQRYIETARREFEETRRKDLGNRLTELTKTVSRLQSEVAG
VQRALADGGTRRPPDGASILSRYITRVRNSFQNLGPPIPETPELTMPGMMDIQPSSETGP
QDAGSPAVPVALEPGSSSPAHVLVHREQEAEGPGDLPLEEGFGAKEDTPNCGLTQCG
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggacccactcacgcctcagcccaactggaccgagatcgtgaataagaagctcaagttc
ccacctttactcctgggggctatccaggaggggcgactgggccttgtgcagcagctgctg
gagtcgggggcagaggccgctggtggtggcccggggggcccactgcgcaatgtggaggag
tctgaggaccgctcctggagggaagccctcaacctggccatccgcctgggccacgaggcc
atcactgatgtgctgctggccaatgtcaagtttgacttccggcagatccacgaagccctg
ctagtggcagtggacaccaaccagccggctgtggtgcgtcgcctgctggcccggctggag
cgggagaagggtcgcaaagtggacacccggtctttctccctggctttctttgattcatcc
attgatggctctcgctttgcacccggggtcactccactcacactggcctgccagaaggac
ctgtacgagattgcccagctgctcatggaccagggccacaccattgcccggccccatcca
gtttcctgtgcttgcctcgagtgcagcaatgcccggcgctacgacctgctgaagttctcc
ctgtcccgtatcaacacctaccgcggcatcgccagcagggcccacctgtcactcgccagt
gaggacgccatgctggctgccttccagctgagccgcgagctcaggcgcctggcacgcaag
gagcctgagtttaagcctgagtacattgcactggagtcactgtgccaggactacggcttt
gagctgctgggcatgtgtcggaaccagagcgaggtcacagcagtgctcaacgacctggga
gaggacagcgacgcagagcccgaggccgagggcctgggccaggcctttgaggagggcatc
cccaacctggcgaggctgcgactggctgtgaactacaaccagaaacggtttgtagcacac
cccatctgccagcaagtgctgtcctccatctggtgtgggaacctggccggctggcgtgga
agcaccaccatctggaagctctttgtcgccttcctcatcttcctcaccatgcccttcctc
tgcctcggctactggctggcacccaagtcccggctgggccgcctgctgaagatcccagtg
ctgaagttcctgctgcactcagcctcctacctgtggttcctcatcttcctgctgggagag
tccctggtcatggagacgcagctgagcaccttccggggccgcagccagagcgtgtgggag
acttcgctgcacatgatctgggtggcaggcttcctgtggtttgagtgtaaggaagtgtgg
atcgagggcctgcgcagctacctcctggactggtggaacttcctggatgtggtcatcctg
tccctgtacttggcagccttcgccttgcgcctccttctggccggcctagcctacttgcac
tgccgggaggcctctgatggggctgcctgccgctacttcacctcagctgagcgagatgag
tggcgcaccgaggacccccagttcttggcagaggtactctttgctgtcaccagcatgctc
agcttcacccgcctggcctacattctgccagcccacgagtcgctgggcaccctacagatc
tccatcggcaggatgatcgatgacatgatccggttcatgtttatcctcatgatcatcctg
actgccttcctctgtggcctcaacaatatctacgtgccttaccaggagacagaacggctg
ggcaacttcaatgaaacattccagttcctgttctggaccatgtttggcatggaggagcac
agtgtggtggacatgccccagtttctggtgcctgaatttgtgggccgggccctttacggc
atcttcactattgtcatggtcatcgtgctgctcaacatgctcattgccatgatcaccaac
tccttccagaagattgaggacgatgctgatgtggagtggaagtttgctcgctccaagctc
tacctgtcctacttccgcgagggcctgacactccctgtgcccttcaacatcctgccctcc
cccaaggccatcttctaccttctcaggagaatcctccagttcatttgctgctgccgctct
ggctgcaaagccaagaagcccgagtaccccccgatcccatcctttgccaaccccggggca
ggaccagggccagcagaaggcgaacgcggctcctaccgcctgcgtgtcatcaaggctcta
gtccagcgctacattgagactgcccggcgtgagttcgaggagactcggcggaaagacttg
ggcaacagattgacggagctgaccaagactgtgtcgcggctgcagagtgaggtagctggt
gtacagcgagccttggcagatgggggaacacgtcggcctcctgatggtgccagcattctc
agccggtacatcacccgggtacgcaacagcttccagaacctgggaccccccatccctgag
accccagagctgacaatgccagggatgatggacattcagccatcttcagaaactgggcct
caggatgctggcagcccggcagttccagttgccctggaacctggctcctcctctccagct
catgtgctggtgcacagggagcaggaagccgaggggcctggggacctgcccctggaggag
ggttttggggccaaagaggacaccccaaactgtggcctgacgcagtgtggctga
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