Ochotona curzoniae (black-lipped pika): 121145486
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Entry
121145486 CDS
T11174
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
ocz05014
Amyotrophic lateral sclerosis
ocz05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121145486 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
121145486 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121145486 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121145486 (NUP98)
03036 Chromosome and associated proteins [BR:
ocz03036
]
121145486 (NUP98)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121145486 (NUP98)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121145486 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
121145486
NCBI-ProteinID:
XP_040820295
LinkDB
All DBs
Position
Unknown
AA seq
1818 aa
AA seq
DB search
MFNKAFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGSSQTKPG
GLFGTNSFSQPATSTSTGFGFGASTGTSSSLFGTANTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPLTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTATGLFGSSPATSSATGL
FSSSTTNSAFSYGQNKTAFGTSTTGFGTNPGGLFGQPNQQTTSLFSKPFGQATTTQTTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTSTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTNSGGLFGNKPTLTLGTNTNTSTFGFGTNTSGNSIF
GSKPAAGTLGAGLGTGFGTALGAGQASLFGNNQPKIGGPLGTGGFGAPGFNTTTATLGFG
APQAPVALTDPNAAAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSQLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNRDSEDLASPSEYPENGERFSFLSKPVDENHQDGDDDSLVSRFYTN
PIAKPIPQTPESAGNKHNNSNSVDDTIVALNMRVALRNGLEGSSEETSFHDESLQDDRED
VENNAYHVHPAGIILTKVGYYTIPSLDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDV
NLTNLNLDDIVHIRRKEVIVYIDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPD
RLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTST
KKLKTAPLPPAGHTTPFQAALNGKPAPPPQSQSPEVEQLGRVVELDSDMIDITQEPVLDS
MLEESVAEDQEPVSASTHIASSLGINPHVLQIMKASLLTEEEDVDMMLDQRFSHLPSKAD
TSQEICSPRLPISASHSSKSRSLVGGLLQSKFTSGTFLSPSASVQEFHTPRASSLMSVPA
TSTWTLPPPLTAVFTVPSPAPEIQLKTVGTRRQPGLVPLKKSITYGKGKLLMDMALFMGR
SFRIGWGPNWTLANSGEQLSGSQELENHRVSDSMEYGFLPNPVVVKSLTESPFKVRLEKL
SLRKKKLDEEDLQLYQTPLELKLKHSTVNVDELCPLFVPSPGVDIIHDYANWVKDASRDL
MESQIVKHWSLTWTLCEALWGHLKELDGQLDEPSEYIQILERRRAFSRWLSHTAAPQIEE
EVSLTQKDNPVEAVFSYLTGNRIGEACSLAQQSGDHRLALLLSQLVGSQSVRELLTMQLV
DWHQLQADCFIQDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTA
SISRALGMYEEAFQNTSEGDGYACCPLPSYLEGSGCVVEEEERDSHRPLQDVCFHLLKLY
SDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSKQCEGVLQVSYAGQLESE
GLWEWAIFVLLHIENSSMREKAVRELLTRHCQLVETPESWAKESFLTQKLCVPAEWIHEA
KAVRAHMESDKHLEALYLFKAGHWNRCHKIVVRHLASDAIINENYDYLKGFLEDLAPPER
SSLIQDWETSGLVYLDYIQVIEMLHRIQQVDFSGYELEQLHTKVTSLCNRIEQIQCYNAK
DRLAQSDMAKCVANLLRVVLSLQHAPDATSDSTPDPQRVPLRLLAPHIGRLPMPEDYALE
ELRSLTQSYLRELTVGSQ
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaagcattcggaacaccctttgggggtggcacaggtggatttggcacaact
tcaacatttgggcagaatactggctttggcactactagtggaggtgcctttggaacatct
gcgtttggttcaagcaacaatactggaggcctattcggtagctcacagaccaaaccagga
ggattatttggtaccaattcatttagccaaccagctacctccacaagcaccggctttggg
tttggagcatcaacaggaacgtcaagtagcttgtttggaactgcaaatacagggaccagt
cttttctcatcccagaacaatgcctttgcacaaaacaaaccaactggctttgggaatttt
ggaacaagtacaagcagtgggggactttttggaactacaaataccacctctaatccattt
ggtagcacatctggctctctttttggaccaagtagtttcactgctgctcccactgggact
accattaaatttaatcctcttactggtacagatactatggtcaaagctggagttagcacc
aatatcagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtctcta
gaggaacttcgtttagaggactatcaggctaatcggaaaggcccacagaaccaggtggga
gcaggtaccgcaactggcttgtttgggtcttctccagccacttcaagtgctacgggactc
ttcagctcctccaccactaattcagccttttcttatggccaaaacaaaactgcctttgga
accagtacaactggatttggaacaaatccaggtggtctctttggccaaccaaatcagcag
actaccagcctctttagcaaaccatttggtcaagccacaaccactcaaaccactggtttt
tcctttggtaataccagcaccttaggacagccaagtaccaacaccatgggcttatttgga
gtaacccaggcctcacagcctggaggtctttttggaacggctacaaacaccagcactgga
acagcatttgggacaggaacagggctctttgggcagaccagtactggatttggtgctgtt
ggttcgaccctgtttggcaataacaagcttaccacatttggaaccagcacaaccagtgct
ccttcatttggtacaaacagtggcgggctctttggtaacaaaccaactctgactttagga
accaatacaaacacttctacttttggttttggcacaaataccagtgggaatagtatcttt
ggaagtaaaccagcagctggaactctgggagctggacttggcacaggatttggaacagct
cttggtgctggacaggcatctttgtttggaaacaaccaacctaagattggagggcctctt
ggtacaggaggctttggggcccctggatttaatactacgacagccactttgggctttgga
gccccccaggcccctgtagctttgacagatccaaatgctgctgctgcccagcaggccgtt
ctccaacagcacctcaatagtctcacatactcacccttcggagactccccgctcttccgg
aatcctatgtcagaccctaagaagaaagaagagagattgaaaccaactaatccagcagcc
cagaaagctcttaccacacctactcattataaattgacacctcgtcctgccaccagagtt
cggccaaaagccctgcagacaacaggcaccgccaagtcacagctctttgatgggctggat
gacgatgaaccgtctcttgccaatggagcattcatgcccaagaaaagcattaagaaactg
gttttaaagaaccttaacaatagcaacctcttttctcctgtgaatcgtgattcagaagat
cttgcttcaccatctgaatatccagaaaatggagaaagatttagtttcctgagcaagcct
gttgatgagaaccatcaggatggtgatgatgactctcttgtatcccgtttttataccaat
cccattgcaaaaccaattcctcaaaccccagagagtgctggcaataagcacaacaacagt
aacagtgtggatgacacaatcgttgcgttaaacatgcgtgttgctctaagaaatggactg
gaaggaagcagtgaagaaacttctttccatgatgagtcattacaggatgatcgagaggat
gtagaaaataacgcgtaccatgtgcacccagcaggaattattctcactaaagttggttac
tatactattccatccttggatgaccttgctaaaattaccaatgaaaaaggagagtgtatt
gtctctgacttcactattggtcgtaaaggttatggttcaatctactttgaaggagatgtg
aatttgacgaatctaaatttagatgatatcgtgcatatccgaagaaaagaagtcattgtc
tacattgatgataaccaaaaaccccctgtgggagaaggactaaataggaaggcggaagtg
acattggatggggtttggccaacagataaaacttcccgttgtttgataaagagcccagac
cgtcttgctgatatcaactacgaggggagattggaagcagtgtcaagaaaacagggagcc
cagttcaaagagtaccggcctgaaactggttcttgggtgtttaaggtctctcatttttct
aagtatggccttcaggattccgatgaagaggaagaggagcgtccatctaaaactagcaca
aagaagctgaagactgcccctttgccccctgctggccacactaccccctttcaggccgct
cttaatggcaaacctgcacctccacctcagagtcagagcccagaggtggaacagttaggg
agggttgtggaactggacagtgacatgatagatatcacccaggagccagttttggattcc
atgctagaagagagcgtggctgaagatcaggaacctgtgtctgcttccacgcacattgct
tcttcactgggaattaatccacatgttttacagatcatgaaagcatcattgcttactgaa
gaagaagatgtagatatgatgctggatcaacgcttcagtcaccttccttccaaagcagat
acttctcaagaaatctgttctcccagactccccatttcagcgtcccactcatcaaaatcg
cgttcgctagttggtggattactacaatcaaaatttacaagtggaactttcctttcacca
agtgcctctgtgcaagagtttcatactcccagagcgtcatctttaatgagtgtcccagcc
acatcaacttggaccttgcctccacccctgactgctgtgtttacagtgcccagcccagcc
cccgagattcagttgaaaacagtcggtacacgcaggcaaccaggcctagtccctcttaaa
aagtctatcacctatggcaaggggaaactcttgatggacatggctctatttatgggacgc
tcatttcgaattggttggggacccaactggactcttgctaatagtggggagcagctgagt
ggctctcaagaactagaaaatcatcgtgtttctgattctatggaatatggatttctacct
aatccagtggttgttaaatccctcactgagtccccattcaaagttcgtttggaaaaactc
agtttaagaaaaaagaagctggatgaagaagacctgcaactgtaccagacacctctggaa
ctcaaattaaaacatagtactgtcaatgtggatgagctgtgtcctctctttgtccccagt
cctggagttgatatcattcatgactatgcaaattgggttaaggatgcgtccagagaccta
atggaatcacagattgtgaagcactggagcctcacatggacattatgtgaagccctttgg
ggacatctgaaggaacttgacggccagctggatgagcccagtgaatacattcaaattctg
gagcgacgaagagctttctctcgctggttgtcccacactgctgctcctcagattgaagag
gaagtctccttaactcagaaagacaaccctgtggaggctgtctttagctacctcacaggc
aacagaatcggagaggcctgttccctagcccagcagtcaggtgaccatcgccttgccctt
cttttgtctcagttggtgggcagccagtctgtccgggagctgctcaccatgcaactcgtg
gattggcaccaactccaagctgactgcttcatccaggatgagaggctgcgcatatttgcc
ctgttagctggaaaaccggtgtggcagctctcagaacagaaacaaatcaatgtgtgctcc
caactggattggaaacgctccctagccgtgcatctgtggtatttgcttccaccaacagcc
tccatttccagggctcttggcatgtacgaagaagcatttcagaatacttccgagggtgac
ggatatgcctgctgcccacttccctcctacctggagggctctggctgtgtggtagaggag
gaggagcgcgactcacacagaccacttcaagatgtctgctttcaccttctaaagctgtat
agtgacaggcattatgacctcaaccagctattggagcctcgaagcataacagccgatcct
ttggactaccgcctaagctggcatctgtgggaggtgctgcgggcacttaattatacccat
ctctccaagcagtgtgagggtgtgctacaggtcagttatgcaggccaactggaaagcgaa
gggctctgggagtgggccatctttgtcctcctgcacattgagaactcaagcatgcgcgag
aaggctgtccgagagctgctcacccggcattgccaactggtggaaacgcctgaatcttgg
gctaaggagtctttccttacccagaagctttgtgtgcctgctgagtggattcatgaggcc
aaagcagtgagagcgcacatggaatctgacaagcacttggaggccctctacttatttaaa
gctggtcactggaaccgttgccacaaaattgtcgtcagacacttagcttctgatgctatc
attaatgaaaactatgactacctgaaggggttcttggaagatctggcacctccagaacgc
agcagcctaattcaggactgggaaacatccgggcttgtttacttggattatattcaggtc
attgaaatgctccaccgtatacagcaggtggatttctcgggttatgagctggaacaatta
cacaccaaagtgacttcgctctgcaaccggatagagcaaatccagtgttacaatgccaag
gatcgccttgctcagtcagatatggccaaatgtgtcgccaacttattgcgggtggtactg
agcttgcagcatgcccctgatgccacttccgactcaacgccagaccctcagcgagttcct
ttgcgtcttttggctccccacatcggccgcctgcccatgcctgaggactatgccttggag
gaactgcgcagcctcacacagtcctatctgcgagaactgactgttgggagccagtga
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integrated database retrieval system
